myRT

myRT report for GCA_014679145.1_ASM1467914v1

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Seq: CP061472.1 Geobacillus thermoleovorans strain SURF-48B chromosome, complete genome (3808577 bp)
Overview 1 RT 1: 423932-428186 bp 2 RT 2: 597627-607517 bp 3 RT 3: 828492-832229 bp 4 RT 4: 945844-951704 bp 5 RT 5: 1133232-1138311 bp 6 RT 6: 1172000-1176920 bp 7 RT 7: 1448720-1457710 bp 8 RT 8: 1661123-1674235 bp 9 RT 9: 1687469-1690437 bp 10 RT 10: 1880618-1887820 bp 11 RT 11: 2428064-2435944 bp 12 RT 12: 2568945-2574648 bp 13 RT 13: 2881035-2886698 bp 14 RT 14: 2900060-2906981 bp 15 RT 15: 3110081-3115731 bp 16 RT 16: 3268479-3274125 bp 17 RT 17: 3277460-3285898 bp 18 RT 18: 3383589-3389759 bp 19 RT 19: 3758634-3762430 bp Neighborhood of RT #1 [423932, 428212] spore_sigI RsgI_N RVT-GII GIIM SASP PBP2_UgpB Neighborhood of RT #2 [597627, 608112] DivIVA ileS RVT-GII GIIM RVT-GII GIIM NRBF2 zf-IS66 DDE_Tnp_IS66 Neighborhood of RT #3 [828492, 832229] zf-C2HCIx2C DUF2564 RVT-GII GIIM CspC Neighborhood of RT #4 [945844, 951718] PRK07740 PCYCGC RVT-GII GIIM FhuD FepD Neighborhood of RT #5 [1133232, 1138334] Spore_permease PAS RVT-GII GIIM sensory_box RsbU HATPase_c_2 Neighborhood of RT #6 [1172000, 1176943] EmrE RVT-GII GIIM COG4708 2A51 Neighborhood of RT #7 [1448720, 1457733] chaperone_ClpB YjzC RVT-GII GIIM PRK00779 carB Neighborhood of RT #8 [1661123, 1674255] COG3547 YhdB RVT-GII GIIM PGM2 CBS_pair_HRP1_like DUF5365 RluA RVT-GII GIIM TlyC YugP Neighborhood of RT #9 [1687469, 1690931] holin_SPP1 RVT-DGRs Avd_like FGE-sulfatase Neighborhood of RT #10 [1880618, 1887831] TMR_SDR_a AlsT RVT-GII GIIM copA P-type_ATPase_Cd-like Neighborhood of RT #11 [2428064, 2435958] GGDEF TIGR00045 RVT-GII GIIM ManA DadA Rieske_YhfW_C Neighborhood of RT #12 [2568945, 2574683] PRK09379 YwqE RVT-GII GIIM YhgE GalU Neighborhood of RT #13 [2881035, 2887216] PutA RVT-GII GIIM YuzL FadB fadB fadB Neighborhood of RT #14 [2900060, 2906981] SUF_scaf_2 sufB RVT-GII GIIM Neighborhood of RT #15 [3110081, 3115736] spore_ytfJ tpx RVT-GII GIIM YtxK PRK00180 Neighborhood of RT #16 [3268479, 3274125] PRK00062 spore_VI_D RVT-GII GIIM spore_ysxE Neighborhood of RT #17 [3277460, 3286320] FolC vWFA YjdB RVT-GII GIIM PilW Neighborhood of RT #18 [3383589, 3389779] PRK05803 gltP RVT-GII GIIM DedA spore_ytvI Neighborhood of RT #19 [3758634, 3762435] IbpA RVT-GII GIIM IbpA OmpR Feature: gene Location: 423932-424690 bp Ori: QNU21783.1 Gene: sigI Feature: domain Description: spore_sigI Location: 424001-424670 bp Feature: domain Description: spore_sigI Location: 424001 -424670 bp Feature: gene Location: 424687-425754 bp Ori: QNU21784.1 Feature: domain Description: RsgI_N Location: 424708-424858 bp Feature: domain Description: RsgI_N Location: 424708-424858 bp Feature: gene Location: 426329-427588 bp Ori: QNU21785.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426527-427145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426527-4271 45 bp Feature: domain Description: GIIM Note: maturase Location: 427193-427406 bp Feature: domain Description: GIIM Note: maturase Location: 4271 93-427406 bp Feature: gene Location: 427654-427854 bp Ori: QNU21786.1 Feature: domain Description: SASP Location: 427672-427834 bp Feature: domain Description: SASP Location: 427672-427834 bp Feature: gene Location: 427973-428212 bp Feature: domain Description: PBP2_UgpB Location: 427982-428186 bp Feature: domain Description: PBP2_UgpB Location: 427982-4281 86 bp Feature: gene Location: 597627-598139 bp Ori: QNU23161.1 Feature: domain Description: DivIVA Location: 597636-598026 bp Feature: domain Description: DivIVA Location: 597636-598026 bp Feature: gene Location: 598511-601285 bp Ori: QNU21950.1 Gene: ileS Feature: domain Description: ileS Location: 598514-601268 bp Feature: domain Description: ileS Location: 59851 4-601 268 bp Feature: gene Location: 601359-602618 bp Ori: QNU21951.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 601557-602175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 601 557-6021 75 bp Feature: domain Description: GIIM Note: maturase Location: 602223-602436 bp Feature: domain Description: GIIM Note: maturase Location: 602223-602436 bp Feature: gene Location: 603246-604505 bp Ori: QNU21952.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 603444-604062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 603444-604062 bp Feature: domain Description: GIIM Note: maturase Location: 604110-604323 bp Feature: domain Description: GIIM Note: maturase Location: 6041 1 0-604323 bp Feature: gene Location: 605622-606575 bp Feature: gene Location: 606665-608112 bp Feature: domain Description: NRBF2 Location: 606713-606830 bp Feature: domain Description: NRBF2 Location: 60671 3-606830 bp Feature: domain Description: zf-IS66 Location: 607016-607148 bp Feature: domain Description: zf-IS66 Location: 60701 6-6071 48 bp Feature: domain Description: DDE_Tnp_IS66 Location: 607196-607517 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6071 96-60751 7 bp Feature: gene Location: 828492-828707 bp Ori: QNU22151.1 Feature: domain Description: zf-C2HCIx2C Location: 828513-828678 bp Feature: domain Description: zf-C2HCIx2C Location: 82851 3-828678 bp Feature: gene Location: 829172-829441 bp Ori: QNU22152.1 Feature: domain Description: DUF2564 Location: 829205-829439 bp Feature: domain Description: DUF2564 Location: 829205-829439 bp Feature: gene Location: 830088-831347 bp Ori: QNU22153.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 830286-830904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 830286-830904 bp Feature: domain Description: GIIM Note: maturase Location: 830952-831165 bp Feature: domain Description: GIIM Note: maturase Location: 830952-831 1 65 bp Feature: gene Location: 831457-831657 bp Ori: QNU22154.1 Feature: domain Description: CspC Location: 831460-831652 bp Feature: domain Description: CspC Location: 831 460-831 652 bp Feature: gene Location: 831978-832229 bp Feature: gene Location: 945844-946572 bp Ori: QNU22236.1 Feature: domain Description: PRK07740 Location: 945853-946570 bp Feature: domain Description: PRK07740 Location: 945853-946570 bp Feature: gene Location: 946752-947243 bp Ori: QNU22237.1 Feature: domain Description: PCYCGC Location: 946788-947235 bp Feature: domain Description: PCYCGC Location: 946788-947235 bp Feature: gene Location: 948204-949463 bp Ori: QNU22238.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 948402-949020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 948402-949020 bp Feature: domain Description: GIIM Note: maturase Location: 949068-949281 bp Feature: domain Description: GIIM Note: maturase Location: 949068-949281 bp Feature: gene Location: 949548-950516 bp Ori: QNU22239.1 Feature: domain Description: FhuD Location: 949719-950484 bp Feature: domain Description: FhuD Location: 94971 9-950484 bp Feature: gene Location: 950717-951718 bp Ori: QNU22240.1 Feature: domain Description: FepD Location: 950744-951704 bp Feature: domain Description: FepD Location: 950744-951 704 bp Feature: gene Location: 1133232-1134335 bp Ori: QNU22433.1 Feature: domain Description: Spore_permease Location: 1133247-1134204 bp Feature: domain Description: Spore_permease Location: 1 1 33247-1 1 34204 bp Feature: gene Location: 1134564-1134755 bp Feature: domain Description: PAS Location: 1134618-1134735 bp Feature: domain Description: PAS Location: 1 1 3461 8-1 1 34735 bp Feature: gene Location: 1135310-1136569 bp Ori: QNU22434.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1135508-1136126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 35508-1 1 361 26 bp Feature: domain Description: GIIM Note: maturase Location: 1136174-1136387 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 361 74-1 1 36387 bp Feature: gene Location: 1136643-1137896 bp Feature: domain Description: sensory_box Location: 1136841-1137015 bp Feature: domain Description: sensory_box Location: 1 1 36841 -1 1 3701 5 bp Feature: domain Description: RsbU Location: 1137156-1137798 bp Feature: domain Description: RsbU Location: 1 1 371 56-1 1 37798 bp Feature: gene Location: 1137906-1138334 bp Ori: QNU22435.1 Feature: domain Description: HATPase_c_2 Location: 1137978-1138311 bp Feature: domain Description: HATPase_c_2 Location: 1 1 37978-1 1 3831 1 bp Feature: gene Location: 1172000-1173001 bp Ori: QNU22470.1 Feature: domain Description: EmrE Location: 1172114-1172915 bp Feature: domain Description: EmrE Location: 1 1 721 1 4-1 1 7291 5 bp Feature: gene Location: 1172998-1173180 bp Feature: gene Location: 1173255-1174514 bp Ori: QNU22471.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1173453-1174071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 73453-1 1 74071 bp Feature: domain Description: GIIM Note: maturase Location: 1174119-1174332 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 741 1 9-1 1 74332 bp Feature: gene Location: 1175153-1175659 bp Ori: QNU22472.1 Feature: domain Description: COG4708 Location: 1175156-1175618 bp Feature: domain Description: COG4708 Location: 1 1 751 56-1 1 7561 8 bp Feature: gene Location: 1175735-1176943 bp Ori: QNU22473.1 Gene: chrA Feature: domain Description: 2A51 Location: 1175804-1176920 bp Feature: domain Description: 2A51 Location: 1 1 75804-1 1 76920 bp Feature: gene Location: 1448720-1451305 bp Ori: QNU22726.1 Gene: clpB Feature: domain Description: chaperone_ClpB Location: 1448738-1451285 bp Feature: domain Description: chaperone_ClpB Location: 1 448738-1 451 285 bp Feature: gene Location: 1451413-1451592 bp Ori: QNU22727.1 Feature: domain Description: YjzC Location: 1451416-1451578 bp Feature: domain Description: YjzC Location: 1 451 41 6-1 451 578 bp Feature: gene Location: 1451820-1453079 bp Ori: QNU22728.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1452018-1452636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 45201 8-1 452636 bp Feature: domain Description: GIIM Note: maturase Location: 1452684-1452897 bp Feature: domain Description: GIIM Note: maturase Location: 1 452684-1 452897 bp Feature: gene Location: 1453670-1454608 bp Ori: QNU22729.1 Gene: argF Feature: domain Description: PRK00779 Location: 1453694-1454603 bp Feature: domain Description: PRK00779 Location: 1 453694-1 454603 bp Feature: gene Location: 1454605-1457733 bp Ori: QNU22730.1 Feature: domain Description: carB Location: 1454608-1457710 bp Feature: domain Description: carB Location: 1 454608-1 45771 0 bp Feature: gene Location: 1661123-1662403 bp Ori: QNU22908.1 Feature: domain Description: COG3547 Location: 1661177-1662221 bp Feature: domain Description: COG3547 Location: 1 661 1 77-1 662221 bp Feature: gene Location: 1662801-1663058 bp Ori: QNU22909.1 Feature: domain Description: YhdB Location: 1662807-1663011 bp Feature: domain Description: YhdB Location: 1 662807-1 66301 1 bp Feature: gene Location: 1663134-1664393 bp Ori: QNU22910.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1663332-1663950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 663332-1 663950 bp Feature: domain Description: GIIM Note: maturase Location: 1663998-1664211 bp Feature: domain Description: GIIM Note: maturase Location: 1 663998-1 66421 1 bp Feature: gene Location: 1664993-1666750 bp Ori: QNU22911.1 Feature: domain Description: PGM2 Location: 1665116-1666685 bp Feature: domain Description: PGM2 Location: 1 6651 1 6-1 666685 bp Feature: gene Location: 1666867-1667313 bp Ori: QNU22912.1 Feature: domain Description: CBS_pair_HRP1_like Location: 1666906-1667242 bp Feature: domain Description: CBS_pair_HRP1 _like Location: 1 666906-1 667242 bp Feature: gene Location: 1668714-1669112 bp Ori: QNU22915.1 Feature: domain Description: DUF5365 Location: 1668717-1669062 bp Feature: domain Description: DUF5365 Location: 1 66871 7-1 669062 bp Feature: gene Location: 1669251-1670150 bp Ori: QNU22916.1 Feature: domain Description: RluA Location: 1669311-1670109 bp Feature: domain Description: RluA Location: 1 66931 1 -1 6701 09 bp Feature: gene Location: 1670270-1671529 bp Ori: QNU22917.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1670468-1671086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 670468-1 671 086 bp Feature: domain Description: GIIM Note: maturase Location: 1671134-1671347 bp Feature: domain Description: GIIM Note: maturase Location: 1 671 1 34-1 671 347 bp Feature: gene Location: 1672112-1673451 bp Feature: domain Description: TlyC Location: 1672121-1673039 bp Feature: domain Description: TlyC Location: 1 6721 21 -1 673039 bp Feature: gene Location: 1673563-1674255 bp Ori: QNU22918.1 Feature: domain Description: YugP Location: 1673566-1674235 bp Feature: domain Description: YugP Location: 1 673566-1 674235 bp Feature: gene Location: 1687469-1687690 bp Ori: QNU22932.1 Feature: domain Description: holin_SPP1 Location: 1687472-1687685 bp Feature: domain Description: holin_SPP1 Location: 1 687472-1 687685 bp Feature: gene Location: 1687692-1687973 bp Feature: gene Location: 1688021-1689094 bp Ori: QNU22934.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1688231-1688885 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 688231 -1 688885 bp Feature: gene Location: 1689431-1689775 bp Ori: QNU22935.1 Gene: avd Feature: domain Description: Avd_like Location: 1689458-1689764 bp Feature: domain Description: Avd_like Location: 1 689458-1 689764 bp Feature: gene Location: 1689846-1690931 bp Ori: QNU22936.1 Feature: domain Description: FGE-sulfatase Location: 1690098-1690437 bp Feature: domain Description: FGE-sulfatase Location: 1 690098-1 690437 bp Feature: gene Location: 1880618-1881493 bp Ori: QNU23117.1 Feature: domain Description: TMR_SDR_a Location: 1880627-1881437 bp Feature: domain Description: TMR_SDR_a Location: 1 880627-1 881 437 bp Feature: gene Location: 1881747-1883216 bp Ori: QNU23118.1 Feature: domain Description: AlsT Location: 1881753-1883118 bp Feature: domain Description: AlsT Location: 1 881 753-1 8831 1 8 bp Feature: gene Location: 1883625-1884884 bp Ori: QNU23119.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1883823-1884441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 883823-1 884441 bp Feature: domain Description: GIIM Note: maturase Location: 1884489-1884702 bp Feature: domain Description: GIIM Note: maturase Location: 1 884489-1 884702 bp Feature: gene Location: 1885485-1885649 bp Feature: gene Location: 1885693-1887831 bp Ori: QNU23121.1 Gene: cadA Feature: domain Description: copA Location: 1885720-1885894 bp Feature: domain Description: copA Location: 1 885720-1 885894 bp Feature: domain Description: P-type_ATPase_Cd-like Location: 1886032-1887820 bp Feature: domain Description: P-type_ATPase_Cd-like Location: 1 886032-1 887820 bp Feature: gene Location: 2428064-2429302 bp Ori: QNU23250.1 Feature: domain Description: GGDEF Location: 2428802-2429276 bp Feature: domain Description: GGDEF Location: 2428802-2429276 bp Feature: gene Location: 2430019-2431173 bp Ori: QNU20322.1 Feature: domain Description: TIGR00045 Location: 2430025-2431144 bp Feature: domain Description: TIGR00045 Location: 2430025-2431 1 44 bp Feature: gene Location: 2431860-2433119 bp Ori: QNU20323.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2432058-2432676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2432058-2432676 bp Feature: domain Description: GIIM Note: maturase Location: 2432724-2432937 bp Feature: domain Description: GIIM Note: maturase Location: 2432724-2432937 bp Feature: gene Location: 2433278-2434240 bp Ori: QNU20324.1 Gene: manA Feature: domain Description: ManA Location: 2433290-2434217 bp Feature: domain Description: ManA Location: 2433290-243421 7 bp Feature: gene Location: 2434432-2435958 bp Ori: QNU20325.1 Feature: domain Description: DadA Location: 2434516-2435608 bp Feature: domain Description: DadA Location: 243451 6-2435608 bp Feature: domain Description: Rieske_YhfW_C Location: 2435704-2435944 bp Feature: domain Description: Rieske_YhfW_C Location: 2435704-2435944 bp Feature: gene Location: 2568945-2569886 bp Ori: QNU20456.1 Feature: domain Description: PRK09379 Location: 2568969-2569869 bp Feature: domain Description: PRK09379 Location: 2568969-2569869 bp Feature: gene Location: 2570120-2570884 bp Ori: QNU20457.1 Feature: domain Description: YwqE Location: 2570123-2570882 bp Feature: domain Description: YwqE Location: 25701 23-2570882 bp Feature: gene Location: 2571666-2572925 bp Ori: QNU20458.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2571864-2572482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2571 864-2572482 bp Feature: domain Description: GIIM Note: maturase Location: 2572530-2572743 bp Feature: domain Description: GIIM Note: maturase Location: 2572530-2572743 bp Feature: gene Location: 2573192-2573746 bp Ori: QNU20459.1 Feature: domain Description: YhgE Location: 2573237-2573597 bp Feature: domain Description: YhgE Location: 2573237-2573597 bp Feature: gene Location: 2573859-2574683 bp Ori: QNU20460.1 Gene: galU Feature: domain Description: GalU Location: 2573865-2574648 bp Feature: domain Description: GalU Location: 2573865-2574648 bp Feature: gene Location: 2881035-2881292 bp Feature: gene Location: 2881457-2882374 bp Ori: QNU20679.1 Feature: domain Description: PutA Location: 2881460-2882369 bp Feature: domain Description: PutA Location: 2881 460-2882369 bp Feature: gene Location: 2883175-2884434 bp Ori: QNU20680.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2883373-2883991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2883373-2883991 bp Feature: domain Description: GIIM Note: maturase Location: 2884039-2884252 bp Feature: domain Description: GIIM Note: maturase Location: 2884039-2884252 bp Feature: gene Location: 2884486-2884641 bp Ori: QNU20681.1 Feature: domain Description: YuzL Location: 2884495-2884615 bp Feature: domain Description: YuzL Location: 2884495-288461 5 bp Feature: gene Location: 2884829-2887216 bp Ori: QNU20682.1 Feature: domain Description: FadB Location: 2884841-2885858 bp Feature: domain Description: FadB Location: 2884841 -2885858 bp Feature: domain Description: fadB Location: 2885894-2886074 bp Feature: domain Description: fadB Location: 2885894-2886074 bp Feature: domain Description: fadB Location: 2886290-2886698 bp Feature: domain Description: fadB Location: 2886290-2886698 bp Feature: gene Location: 2900060-2900509 bp Ori: QNU20699.1 Feature: domain Description: SUF_scaf_2 Location: 2900081-2900483 bp Feature: domain Description: SUF_scaf_2 Location: 2900081 -2900483 bp Feature: gene Location: 2900516-2901913 bp Ori: QNU20700.1 Gene: sufB Feature: domain Description: sufB Location: 2900546-2901884 bp Feature: domain Description: sufB Location: 2900546-2901 884 bp Feature: gene Location: 2902677-2903936 bp Ori: QNU20701.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2902875-2903493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2902875-2903493 bp Feature: domain Description: GIIM Note: maturase Location: 2903541-2903754 bp Feature: domain Description: GIIM Note: maturase Location: 2903541 -2903754 bp Feature: gene Location: 2904319-2905176 bp Feature: gene Location: 2905930-2906981 bp Feature: gene Location: 3110081-3110545 bp Ori: QNU20873.1 Gene: ytfJ Feature: domain Description: spore_ytfJ Location: 3110090-3110501 bp Feature: domain Description: spore_ytfJ Location: 31 1 0090-31 1 0501 bp Feature: gene Location: 3110670-3111170 bp Ori: QNU20874.1 Gene: tpx Feature: domain Description: tpx Location: 3110673-3111159 bp Feature: domain Description: tpx Location: 31 1 0673-31 1 1 1 59 bp Feature: gene Location: 3111758-3113017 bp Ori: QNU20875.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3111956-3112574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 1 956-31 1 2574 bp Feature: domain Description: GIIM Note: maturase Location: 3112622-3112835 bp Feature: domain Description: GIIM Note: maturase Location: 31 1 2622-31 1 2835 bp Feature: gene Location: 3113177-3114166 bp Ori: QNU20876.1 Feature: domain Description: YtxK Location: 3113237-3114152 bp Feature: domain Description: YtxK Location: 31 1 3237-31 1 41 52 bp Feature: gene Location: 3114546-3115736 bp Ori: QNU20877.1 Feature: domain Description: PRK00180 Location: 3114555-3115731 bp Feature: domain Description: PRK001 80 Location: 31 1 4555-31 1 5731 bp Feature: gene Location: 3268479-3269768 bp Ori: QNU21015.1 Gene: hemL Feature: domain Description: PRK00062 Location: 3268494-3269757 bp Feature: domain Description: PRK00062 Location: 3268494-3269757 bp Feature: gene Location: 3269887-3270936 bp Ori: QNU21016.1 Gene: spoVID Feature: domain Description: spore_VI_D Location: 3269905-3270907 bp Feature: domain Description: spore_VI_D Location: 3269905-3270907 bp Feature: gene Location: 3271506-3272765 bp Ori: QNU21017.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3271704-3272322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3271 704-3272322 bp Feature: domain Description: GIIM Note: maturase Location: 3272370-3272583 bp Feature: domain Description: GIIM Note: maturase Location: 3272370-3272583 bp Feature: gene Location: 3272867-3273898 bp Ori: QNU21018.1 Gene: ysxE Feature: domain Description: spore_ysxE Location: 3272891-3273782 bp Feature: domain Description: spore_ysxE Location: 3272891 -3273782 bp Feature: gene Location: 3273937-3274125 bp Feature: gene Location: 3277460-3278755 bp Ori: QNU21021.1 Feature: domain Description: FolC Location: 3277472-3278750 bp Feature: domain Description: FolC Location: 3277472-3278750 bp Feature: gene Location: 3278824-3282063 bp Ori: QNU21022.1 Feature: domain Description: vWFA Location: 3279418-3280150 bp Feature: domain Description: vWFA Location: 327941 8-32801 50 bp Feature: domain Description: YjdB Location: 3281512-3281725 bp Feature: domain Description: YjdB Location: 3281 51 2-3281 725 bp Feature: gene Location: 3282662-3283921 bp Ori: QNU21023.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3282860-3283478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3282860-3283478 bp Feature: domain Description: GIIM Note: maturase Location: 3283526-3283739 bp Feature: domain Description: GIIM Note: maturase Location: 3283526-3283739 bp Feature: gene Location: 3284017-3285738 bp Feature: gene Location: 3285751-3286320 bp Ori: QNU21025.1 Feature: domain Description: PilW Location: 3285757-3285898 bp Feature: domain Description: PilW Location: 3285757-3285898 bp Feature: gene Location: 3383589-3384302 bp Ori: QNU23291.1 Gene: sigK Feature: domain Description: PRK05803 Location: 3383598-3384285 bp Feature: domain Description: PRK05803 Location: 3383598-3384285 bp Feature: gene Location: 3384500-3385768 bp Ori: QNU21117.1 Feature: domain Description: gltP Location: 3384509-3385760 bp Feature: domain Description: gltP Location: 3384509-3385760 bp Feature: gene Location: 3386659-3387918 bp Ori: QNU21118.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3386857-3387475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3386857-3387475 bp Feature: domain Description: GIIM Note: maturase Location: 3387523-3387736 bp Feature: domain Description: GIIM Note: maturase Location: 3387523-3387736 bp Feature: gene Location: 3388062-3388673 bp Ori: QNU21119.1 Feature: domain Description: DedA Location: 3388086-3388650 bp Feature: domain Description: DedA Location: 3388086-3388650 bp Feature: gene Location: 3388754-3389779 bp Ori: QNU21120.1 Gene: ytvI Feature: domain Description: spore_ytvI Location: 3388769-3389759 bp Feature: domain Description: spore_ytvI Location: 3388769-3389759 bp Feature: gene Location: 3758634-3758771 bp Feature: gene Location: 3758887-3759033 bp Feature: domain Description: IbpA Location: 3758896-3759016 bp Feature: domain Description: IbpA Location: 3758896-375901 6 bp Feature: gene Location: 3759585-3760844 bp Ori: QNU21460.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3759783-3760401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3759783-3760401 bp Feature: domain Description: GIIM Note: maturase Location: 3760449-3760662 bp Feature: domain Description: GIIM Note: maturase Location: 3760449-3760662 bp Feature: gene Location: 3760917-3761237 bp Feature: domain Description: IbpA Location: 3760968-3761205 bp Feature: domain Description: IbpA Location: 3760968-3761 205 bp Feature: gene Location: 3761761-3762435 bp Ori: QNU21461.1 Feature: domain Description: OmpR Location: 3761773-3762430 bp Feature: domain Description: OmpR Location: 3761 773-3762430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT spore_sigI (TIGR02895), RsgI_N (pfam12791), RVT-GII, GIIM (pfam08388), SASP (pfam00269), PBP2_UgpB (cd14748), DivIVA (pfam05103), ileS (TIGR00392), NRBF2 (pfam08961), zf-IS66 (pfam13005)
DDE_Tnp_IS66 (pfam03050), zf-C2HCIx2C (pfam10782), DUF2564 (pfam10819), CspC (COG1278), PRK07740 (hypothetical protein; Provisional), PCYCGC (pfam13798), FhuD (cd01146), FepD (COG0609), Spore_permease (pfam03845), PAS (smart00091)
sensory_box (TIGR00229), RsbU (COG2208), HATPase_c_2 (pfam13581), EmrE (pfam13536), COG4708 (Uncharacterized membrane protein ), 2A51 (TIGR00937), chaperone_ClpB (TIGR03346), YjzC (pfam14168), PRK00779 (ornithine carbamoyltransferase; Provisional), carB (PRK12815)
COG3547 (Transposase ), YhdB (pfam14148), PGM2 (cd05799), CBS_pair_HRP1_like (cd04622), DUF5365 (pfam17326), RluA (COG0564), TlyC (COG1253), YugP (COG2738), holin_SPP1 (TIGR01592), RVT-DGRs
Avd_like (cd16376), FGE-sulfatase (pfam03781), TMR_SDR_a (cd05269), AlsT (COG1115), copA (PRK10671), P-type_ATPase_Cd-like (cd07545), GGDEF (TIGR00254), TIGR00045 (glycerate kinase), ManA (COG1482), DadA (COG0665)
Rieske_YhfW_C (cd03477), PRK09379 (LytR family transcriptional regulator), YwqE (COG4464), YhgE (COG1511), GalU (COG1210), PutA (COG0506), YuzL (pfam14115), FadB (TIGR02437), fadB (PRK11730), SUF_scaf_2 (TIGR01994)
sufB (TIGR01980), spore_ytfJ (TIGR02874), tpx (PRK00522), YtxK (COG0827), PRK00180 (acetate kinase A/propionate kinase 2; Reviewed), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), spore_VI_D (TIGR02907), spore_ysxE (TIGR02904), FolC (COG0285), vWFA (cl00057)
YjdB (COG5492), PilW (pfam16074), PRK05803 (RNA polymerase sporulation sigma factor SigK), gltP (PRK11283), DedA (COG0586), spore_ytvI (TIGR02872), IbpA (COG0071), OmpR (COG0745)