myRT

myRT report for GCA_014679335.1_ASM1467933v1

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Seq: CP061471.1 Geobacillus zalihae strain SURF-114 chromosome, complete genome (3563283 bp)
Overview 1 RT 1: 247414-253330 bp 2 RT 2: 519937-525139 bp 3 RT 3: 1833297-1840979 bp 4 RT 4: 2935290-2940788 bp 5 RT 5: 3412468-3419270 bp Neighborhood of RT #1 [247414, 253335] PRK07657 MmdA RVT-GII GIIM MarR EmrA EmrA Neighborhood of RT #2 [519937, 525168] DnaA_N FadM RVT-GII Fe-ADH NMO Neighborhood of RT #3 [1833297, 1841638] cpdB RVT-GII GIIM COG5421 AAA_22 Neighborhood of RT #4 [2935290, 2941081] AcrR RVT-GII GIIM DUF2929 PldB Neighborhood of RT #5 [3412468, 3419272] recA RecA RVT-GII HNHc RNase_Y Feature: gene Location: 247414-248196 bp Ori: QNU24983.1 Feature: domain Description: PRK07657 Location: 247420-248194 bp Feature: domain Description: PRK07657 Location: 247420-2481 94 bp Feature: gene Location: 248366-249919 bp Ori: QNU24984.1 Feature: domain Description: MmdA Location: 248378-249914 bp Feature: domain Description: MmdA Location: 248378-24991 4 bp Feature: gene Location: 250773-252032 bp Ori: QNU24985.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250971-251589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250971 -251 589 bp Feature: domain Description: GIIM Note: maturase Location: 251637-251850 bp Feature: domain Description: GIIM Note: maturase Location: 251 637-251 850 bp Feature: gene Location: 252253-252693 bp Ori: QNU24986.1 Feature: domain Description: MarR Location: 252298-252667 bp Feature: domain Description: MarR Location: 252298-252667 bp Feature: gene Location: 252697-253335 bp Ori: QNU24987.1 Feature: domain Description: EmrA Location: 252721-252874 bp Feature: domain Description: EmrA Location: 252721 -252874 bp Feature: domain Description: EmrA Location: 253006-253330 bp Feature: domain Description: EmrA Location: 253006-253330 bp Feature: gene Location: 519937-520341 bp Ori: QNU25204.1 Feature: domain Description: DnaA_N Location: 519952-520132 bp Feature: domain Description: DnaA_N Location: 51 9952-5201 32 bp Feature: gene Location: 520360-520761 bp Ori: QNU25205.1 Feature: domain Description: FadM Location: 520363-520738 bp Feature: domain Description: FadM Location: 520363-520738 bp Feature: gene Location: 521015-522275 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 521213-521576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 521 21 3-521 576 bp Feature: gene Location: 522871-524058 bp Ori: QNU25206.1 Feature: domain Description: Fe-ADH Location: 522910-524014 bp Feature: domain Description: Fe-ADH Location: 52291 0-52401 4 bp Feature: gene Location: 524134-525168 bp Ori: QNU25207.1 Feature: domain Description: NMO Location: 524158-525139 bp Feature: domain Description: NMO Location: 5241 58-5251 39 bp Feature: gene Location: 1833297-1835624 bp Ori: QNU23370.1 Feature: domain Description: cpdB Location: 1833387-1835277 bp Feature: domain Description: cpdB Location: 1 833387-1 835277 bp Feature: gene Location: 1836006-1837067 bp Feature: gene Location: 1837238-1837911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1837241-1837469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 837241 -1 837469 bp Feature: domain Description: GIIM Note: maturase Location: 1837517-1837733 bp Feature: domain Description: GIIM Note: maturase Location: 1 83751 7-1 837733 bp Feature: gene Location: 1838052-1839710 bp Ori: QNU23372.1 Feature: domain Description: COG5421 Location: 1838307-1839498 bp Feature: domain Description: COG5421 Location: 1 838307-1 839498 bp Feature: gene Location: 1840454-1841638 bp Feature: domain Description: AAA_22 Location: 1840589-1840979 bp Feature: domain Description: AAA_22 Location: 1 840589-1 840979 bp Feature: gene Location: 2935290-2935863 bp Feature: domain Description: AcrR Location: 2935338-2935560 bp Feature: domain Description: AcrR Location: 2935338-2935560 bp Feature: gene Location: 2935954-2938079 bp Feature: gene Location: 2938682-2939941 bp Ori: QNU24261.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2938880-2939498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2938880-2939498 bp Feature: domain Description: GIIM Note: maturase Location: 2939546-2939759 bp Feature: domain Description: GIIM Note: maturase Location: 2939546-2939759 bp Feature: gene Location: 2940019-2940207 bp Ori: QNU24262.1 Feature: domain Description: DUF2929 Location: 2940022-2940184 bp Feature: domain Description: DUF2929 Location: 2940022-29401 84 bp Feature: gene Location: 2940341-2941081 bp Ori: QNU24263.1 Feature: domain Description: PldB Location: 2940416-2940788 bp Feature: domain Description: PldB Location: 294041 6-2940788 bp Feature: gene Location: 3412468-3412755 bp Feature: domain Description: recA Location: 3412474-3412756 bp Feature: domain Description: recA Location: 341 2474-341 2756 bp Feature: gene Location: 3413693-3413860 bp Feature: domain Description: RecA Location: 3413783-3413861 bp Feature: domain Description: RecA Location: 341 3783-341 3861 bp Feature: gene Location: 3414574-3416481 bp Ori: QNU24694.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3414916-3415618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341 491 6-341 561 8 bp Feature: domain Description: HNHc Note: nucleases Location: 3416236-3416404 bp Feature: domain Description: HNHc Note: nucleases Location: 341 6236-341 6404 bp Feature: gene Location: 3416590-3417341 bp Feature: gene Location: 3417716-3419272 bp Ori: QNU24695.1 Gene: rny Feature: domain Description: RNase_Y Location: 3417734-3419270 bp Feature: domain Description: RNase_Y Location: 341 7734-341 9270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07657 (enoyl-CoA hydratase; Provisional), MmdA (COG4799), RVT-GII, GIIM (pfam08388), MarR (pfam01047), EmrA (COG1566), DnaA_N (pfam11638), FadM (COG0824), Fe-ADH (pfam00465), NMO (pfam03060)
cpdB (PRK09420), COG5421 (Transposase ), AAA_22 (pfam13401), AcrR (COG1309), DUF2929 (pfam11151), PldB (COG2267), recA (PRK09519), RecA (pfam00154), HNHc (smart00507), RNase_Y (TIGR03319)