myRT

myRT report for GCA_014679925.1_ASM1467992v1

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Seq: CP061475.1 Geobacillus sp. 44C chromosome, complete genome (3329032 bp)
Overview 1 RT 1: 2756115-2763385 bp 2 RT 2: 2939663-2945598 bp 3 RT 3: 2966232-2973230 bp Neighborhood of RT #1 [2756115, 2763387] PRK00549 recA RVT-GII recA RNase_Y Neighborhood of RT #2 [2939663, 2945627] COG3666 DDE_Tnp_1 DUF772 IS5 DDE_Tnp_1_6 RVT-GII DDE_Tnp_1_6 lantibio_gallid Neighborhood of RT #3 [2966232, 2973259] retropepsin_like_bacteria RVT-GII DadA Feature: gene Location: 2756115-2757365 bp Ori: QNU34084.1 Feature: domain Description: PRK00549 Location: 2756121-2757348 bp Feature: domain Description: PRK00549 Location: 27561 21 -2757348 bp Feature: gene Location: 2757529-2757816 bp Feature: domain Description: recA Location: 2757535-2757817 bp Feature: domain Description: recA Location: 2757535-275781 7 bp Feature: gene Location: 2758658-2760475 bp Ori: QNU34085.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2758913-2759624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275891 3-2759624 bp Feature: gene Location: 2760519-2761370 bp Ori: QNU34086.1 Gene: recA Feature: domain Description: recA Location: 2760609-2761344 bp Feature: domain Description: recA Location: 2760609-2761 344 bp Feature: gene Location: 2761831-2763387 bp Ori: QNU34087.1 Gene: rny Feature: domain Description: RNase_Y Location: 2761849-2763385 bp Feature: domain Description: RNase_Y Location: 2761 849-2763385 bp Feature: gene Location: 2939663-2940391 bp Feature: domain Description: COG3666 Location: 2939666-2939978 bp Feature: domain Description: COG3666 Location: 2939666-2939978 bp Feature: domain Description: DDE_Tnp_1 Location: 2939990-2940314 bp Feature: domain Description: DDE_Tnp_1 Location: 2939990-294031 4 bp Feature: gene Location: 2941438-2942907 bp Ori: QNU34216.1 Feature: domain Description: DUF772 Location: 2941597-2941822 bp Feature: domain Description: DUF772 Location: 2941 597-2941 822 bp Feature: domain Description: IS5 Location: 2942089-2942197 bp Feature: domain Description: IS5 Location: 2942089-29421 97 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2942404-2942758 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 2942404-2942758 bp Feature: gene Location: 2942966-2944615 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2943053-2943764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2943053-2943764 bp Feature: gene Location: 2944752-2945084 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2944761-2945055 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 2944761 -2945055 bp Feature: gene Location: 2945481-2945627 bp Ori: QNU34217.1 Feature: domain Description: lantibio_gallid Location: 2945484-2945598 bp Feature: domain Description: lantibio_gallid Location: 2945484-2945598 bp Feature: gene Location: 2966232-2967276 bp Feature: gene Location: 2967369-2967746 bp Ori: QNU36197.1 Feature: domain Description: retropepsin_like_bacteria Location: 2967471-2967714 bp Feature: domain Description: retropepsin_like_bacteria Location: 2967471 -296771 4 bp Feature: gene Location: 2968570-2970387 bp Ori: QNU34231.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2968825-2969536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2968825-2969536 bp Feature: gene Location: 2971575-2972024 bp Feature: gene Location: 2972135-2973259 bp Ori: QNU36198.1 Feature: domain Description: DadA Location: 2972141-2973230 bp Feature: domain Description: DadA Location: 29721 41 -2973230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00549 (competence damage-inducible protein A; Provisional), recA (PRK09519), RVT-GII, RNase_Y (TIGR03319), COG3666 (Transposase ), DDE_Tnp_1 (pfam01609), DUF772 (pfam05598), IS5 (COG3039), DDE_Tnp_1_6 (pfam13751), lantibio_gallid (TIGR03731)
retropepsin_like_bacteria (cd05483), DadA (COG0665)