myRT

myRT report for GCA_014702245.1_ASM1470224v1

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Seq: CP034247.1 Elizabethkingia anophelis strain SUE chromosome, complete genome (4201198 bp)
Overview 1 RT 1: 581096-583956 bp 2 RT 2: 627847-637208 bp 3 RT 3: 3298549-3301409 bp 4 RT 4: 3745946-3751464 bp Neighborhood of RT #1 [581096, 583956] RVT-DGRs Neighborhood of RT #2 [627847, 637249] dnaG Toprim_2 Eco57I COG4646 Helicase_C RVT-DGRs Fib_succ_major Avd_like Neighborhood of RT #3 [3298549, 3301409] RVT-DGRs Neighborhood of RT #4 [3745946, 3751925] DUF4133 Bac_Flav_CT_G RVT-GII group_II_RT_mat HNHc Bac_Flav_CT_G DUF4141 Feature: gene Location: 581096-581548 bp Feature: gene Location: 581560-582024 bp Feature: gene Location: 582236-583201 bp Ori: QNV08253.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 582443-583037 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 582443-583037 bp Feature: gene Location: 583180-583476 bp Feature: gene Location: 583489-583956 bp Feature: gene Location: 627847-633666 bp Feature: domain Description: dnaG Location: 628075-628357 bp Feature: domain Description: dnaG Location: 628075-628357 bp Feature: domain Description: Toprim_2 Location: 628519-628807 bp Feature: domain Description: Toprim_2 Location: 62851 9-628807 bp Feature: domain Description: Eco57I Location: 629719-629902 bp Feature: domain Description: Eco57I Location: 62971 9-629902 bp Feature: domain Description: COG4646 Location: 631246-632248 bp Feature: domain Description: COG4646 Location: 631 246-632248 bp Feature: domain Description: Helicase_C Location: 632671-632884 bp Feature: domain Description: Helicase_C Location: 632671 -632884 bp Feature: gene Location: 633905-634846 bp Feature: gene Location: 635340-636554 bp Ori: QNV08297.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 635529-636270 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 635529-636270 bp Feature: gene Location: 636572-636775 bp Feature: domain Description: Fib_succ_major Location: 636578-636746 bp Feature: domain Description: Fib_succ_major Location: 636578-636746 bp Feature: gene Location: 636875-637249 bp Ori: QNV08298.1 Feature: domain Description: Avd_like Location: 636902-637208 bp Feature: domain Description: Avd_like Location: 636902-637208 bp Feature: gene Location: 3298549-3299016 bp Feature: gene Location: 3299029-3299325 bp Feature: gene Location: 3299304-3300269 bp Ori: QNV10543.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3299511-3300105 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 329951 1 -33001 05 bp Feature: gene Location: 3300481-3300945 bp Feature: gene Location: 3300957-3301409 bp Feature: gene Location: 3745946-3746278 bp Ori: QNV11485.1 Feature: domain Description: DUF4133 Location: 3745964-3746231 bp Feature: domain Description: DUF41 33 Location: 3745964-3746231 bp Feature: gene Location: 3746275-3748338 bp Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 3746278-3748339 bp Feature: domain Description: Bac_Flav_CT_G Location: 3746278-3748339 bp Feature: gene Location: 3748909-3750720 bp Ori: QNV10926.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3749173-3749995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37491 73-3749995 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3750205-3750325 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3750205-3750325 bp Feature: domain Description: HNHc Note: nucleases Location: 3750538-3750694 bp Feature: domain Description: HNHc Note: nucleases Location: 3750538-3750694 bp Feature: gene Location: 3750780-3751265 bp Ori: QNV10927.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 3750801-3751239 bp Feature: domain Description: Bac_Flav_CT_G Location: 3750801 -3751 239 bp Feature: gene Location: 3751293-3751925 bp Ori: QNV10928.1 Feature: domain Description: DUF4141 Location: 3751308-3751464 bp Feature: domain Description: DUF41 41 Location: 3751 308-3751 464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, dnaG (TIGR01391), Toprim_2 (pfam13155), Eco57I (pfam07669), COG4646 (Adenine-specific DNA methylase, N12 class ), Helicase_C (pfam00271), Fib_succ_major (TIGR02145), Avd_like (cd16376), DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783)
RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), DUF4141 (pfam13605)