myRT

myRT report for GCA_014706535.1_ASM1470653v1

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Seq: CP044546.1 Pseudomonas sp. CFA chromosome, complete genome (5935153 bp)
Overview 1 RT 1: 606212-619324 bp 2 RT 2: 2127100-2131884 bp 3 RT 3: 4764804-4771588 bp 4 RT 4: 5381198-5385935 bp Neighborhood of RT #1 [606212, 619347] PRK13879 TrbL_P dnaG RVT-UNC CysE Lrp Neighborhood of RT #2 [2127100, 2131884] PRK09330 LpxC RVT-GII GIIM DciA Neighborhood of RT #3 [4764804, 4771602] PBP2_phosphate_like_1 PRK06116 RVT-GII GIIM galU CytC Neighborhood of RT #4 [5381198, 5385961] flgB RVT-GII GIIM CheR CheW CheY Feature: gene Location: 606212-606967 bp Ori: QNV65036.1 Gene: trbJ Feature: domain Description: PRK13879 Location: 606251-606965 bp Feature: domain Description: PRK1 3879 Location: 606251 -606965 bp Feature: gene Location: 607169-608563 bp Ori: QNV65037.1 Gene: trbL Feature: domain Description: TrbL_P Location: 607250-608144 bp Feature: domain Description: TrbL_P Location: 607250-6081 44 bp Feature: gene Location: 609669-617225 bp Ori: QNV65038.1 Feature: domain Description: dnaG Location: 609744-610935 bp Feature: domain Description: dnaG Location: 609744-61 0935 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 611724-612294 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 61 1 724-61 2294 bp Feature: gene Location: 618144-618698 bp Ori: QNV65039.1 Feature: domain Description: CysE Location: 618258-618654 bp Feature: domain Description: CysE Location: 61 8258-61 8654 bp Feature: gene Location: 618886-619347 bp Ori: QNV65040.1 Feature: domain Description: Lrp Location: 618910-619324 bp Feature: domain Description: Lrp Location: 61 891 0-61 9324 bp Feature: gene Location: 2127100-2128296 bp Ori: QNV66222.1 Gene: ftsZ Feature: domain Description: PRK09330 Location: 2127118-2128291 bp Feature: domain Description: PRK09330 Location: 21 271 1 8-21 28291 bp Feature: gene Location: 2128409-2129320 bp Ori: QNV66223.1 Feature: domain Description: LpxC Location: 2128412-2129303 bp Feature: domain Description: LpxC Location: 21 2841 2-21 29303 bp Feature: gene Location: 2129800-2131220 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2130157-2130772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 301 57-21 30772 bp Feature: domain Description: GIIM Note: maturase Location: 2130826-2131054 bp Feature: domain Description: GIIM Note: maturase Location: 21 30826-21 31 054 bp Feature: gene Location: 2131287-2131742 bp Ori: QNV66224.1 Feature: domain Description: DciA Location: 2131323-2131572 bp Feature: domain Description: DciA Location: 21 31 323-21 31 572 bp Feature: gene Location: 2131786-2131884 bp Feature: gene Location: 4764804-4766110 bp Feature: domain Description: PBP2_phosphate_like_1 Location: 4764873-4765695 bp Feature: domain Description: PBP2_phosphate_like_1 Location: 4764873-4765695 bp Feature: gene Location: 4766241-4767596 bp Ori: QNV68256.1 Gene: gorA Feature: domain Description: PRK06116 Location: 4766244-4767582 bp Feature: domain Description: PRK061 1 6 Location: 4766244-4767582 bp Feature: gene Location: 4767718-4769139 bp Ori: QNV68257.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4768075-4768690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4768075-4768690 bp Feature: domain Description: GIIM Note: maturase Location: 4768747-4768972 bp Feature: domain Description: GIIM Note: maturase Location: 4768747-4768972 bp Feature: gene Location: 4769612-4770451 bp Ori: QNV68258.1 Gene: galU Feature: domain Description: galU Location: 4769621-4770404 bp Feature: domain Description: galU Location: 4769621 -4770404 bp Feature: gene Location: 4770688-4771602 bp Ori: QNV68259.1 Feature: domain Description: CytC Location: 4770751-4771588 bp Feature: domain Description: CytC Location: 4770751 -4771 588 bp Feature: gene Location: 5381198-5381608 bp Ori: QNV68728.1 Gene: flgB Feature: domain Description: flgB Location: 5381201-5381606 bp Feature: domain Description: flgB Location: 5381 201 -5381 606 bp Feature: gene Location: 5381887-5381997 bp Feature: gene Location: 5382263-5383684 bp Ori: QNV68730.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5382620-5383235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5382620-5383235 bp Feature: domain Description: GIIM Note: maturase Location: 5383289-5383517 bp Feature: domain Description: GIIM Note: maturase Location: 5383289-538351 7 bp Feature: gene Location: 5384152-5384979 bp Ori: QNV68731.1 Feature: domain Description: CheR Location: 5384173-5384974 bp Feature: domain Description: CheR Location: 53841 73-5384974 bp Feature: gene Location: 5385032-5385961 bp Ori: QNV68732.1 Feature: domain Description: CheW Location: 5385047-5385521 bp Feature: domain Description: CheW Location: 5385047-5385521 bp Feature: domain Description: CheY Location: 5385572-5385935 bp Feature: domain Description: CheY Location: 5385572-5385935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13879 (P-type conjugative transfer protein TrbJ), TrbL_P (TIGR02783), dnaG (TIGR01391), RVT-UG24/RVT-UG19/RVT-UG20(RVT-UNC), CysE (COG1045), Lrp (COG1522), PRK09330 (cell division protein FtsZ; Validated), LpxC (pfam03331), RVT-GII, GIIM (pfam08388)
DciA, PBP2_phosphate_like_1 (cd13653), PRK06116 (glutathione reductase; Validated), galU (TIGR01099), CytC (COG3258), flgB (PRK12685), CheR (pfam01739), CheW (smart00260), CheY (COG0784)