myRT

myRT report for GCA_900010805.1_C._beijerinckii_DSM_6423

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Seq: LN908213.1 Clostridium beijerinckii isolate C. beijerinckii DSM 6423 genome assembly, chromosome: I (6383364 bp)
Overview 1 RT 1: 852597-860388 bp 2 RT 2: 4668300-4673815 bp Neighborhood of RT #1 [852597, 860402] sensory_box PAS_9 sensory_box SpoIIE DUF1848 RVT-UG25 DUF1848 Neighborhood of RT #2 [4668300, 4673883] PucR WrbA RVT-GII GIIM Recombinase Zn_ribbon_recom Feature: gene Location: 852597-854420 bp Ori: CUU45918.1 Feature: domain Description: sensory_box Location: 852660-853029 bp Feature: domain Description: sensory_box Location: 852660-853029 bp Feature: domain Description: PAS_9 Location: 853062-853350 bp Feature: domain Description: PAS_9 Location: 853062-853350 bp Feature: domain Description: sensory_box Location: 853383-853731 bp Feature: domain Description: sensory_box Location: 853383-853731 bp Feature: domain Description: SpoIIE Location: 853890-854415 bp Feature: domain Description: SpoIIE Location: 853890-85441 5 bp Feature: gene Location: 855210-855728 bp Ori: CUU45919.1 Feature: domain Description: DUF1848 Location: 855315-855699 bp Feature: domain Description: DUF1 848 Location: 85531 5-855699 bp Feature: gene Location: 855913-858744 bp Ori: CUU45920.1 Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 857218-857629 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 85721 8-857629 bp Feature: gene Location: 858858-859220 bp Feature: gene Location: 859521-860402 bp Ori: CUU45922.1 Feature: domain Description: DUF1848 Location: 859578-860388 bp Feature: domain Description: DUF1 848 Location: 859578-860388 bp Feature: gene Location: 4668300-4669874 bp Ori: CUU49676.1 Feature: domain Description: PucR Location: 4669407-4669830 bp Feature: domain Description: PucR Location: 4669407-4669830 bp Feature: gene Location: 4669898-4670461 bp Ori: CUU49677.1 Feature: domain Description: WrbA Location: 4669901-4670261 bp Feature: domain Description: WrbA Location: 4669901 -4670261 bp Feature: gene Location: 4670929-4672344 bp Ori: CUU49678.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4671286-4671904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4671 286-4671 904 bp Feature: domain Description: GIIM Note: maturase Location: 4671955-4672183 bp Feature: domain Description: GIIM Note: maturase Location: 4671 955-46721 83 bp Feature: gene Location: 4672739-4673209 bp Feature: gene Location: 4673194-4673883 bp Ori: CUU49680.1 Feature: domain Description: Recombinase Location: 4673335-4673653 bp Feature: domain Description: Recombinase Location: 4673335-4673653 bp Feature: domain Description: Zn_ribbon_recom Location: 4673701-4673815 bp Feature: domain Description: Zn_ribbon_recom Location: 4673701 -467381 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sensory_box (TIGR00229), PAS_9 (pfam13426), SpoIIE (pfam07228), DUF1848 (pfam08902), RVT-UG25, PucR (pfam07905), WrbA (COG0655), RVT-GII, GIIM (pfam08388), Recombinase (pfam07508)
Zn_ribbon_recom (pfam13408)