myRT

myRT report for GCA_900070365.1_Alloactinosynnema_sp._L-07

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Seq: LN850107.1 Alloactinosynnema sp. L-07 genome assembly Alloactinosynnema sp. L-07, chromosome : I (7405112 bp)
Overview 1 RT 1: 236150-239345 bp 2 RT 2: 2120021-2123785 bp 3 RT 3: 2824347-2831031 bp Neighborhood of RT #1 [236150, 239345] QueC RVT-G2Lb pfam03781 Neighborhood of RT #2 [2120021, 2123958] RVT_N RVT-GII GIIM Transposase_20 Neighborhood of RT #3 [2824347, 2831435] flhA RVT-GII InsE HTH_21 rve T7_EssCb_Firm Feature: gene Location: 236150-236632 bp Feature: gene Location: 236639-237343 bp Ori: CRK55202.1 Feature: domain Description: QueC Location: 236675-237335 bp Feature: domain Description: QueC Location: 236675-237335 bp Feature: gene Location: 237509-238324 bp Ori: CRK55203.1 Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 237761-238280 bp Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 237761 -238280 bp Feature: gene Location: 238330-238887 bp Ori: CRK55204.1 Feature: domain Description: pfam03781 Location: 238465-238879 bp Feature: domain Description: pfam03781 Location: 238465-238879 bp Feature: gene Location: 238884-239345 bp Feature: gene Location: 2120021-2120152 bp Feature: gene Location: 2120156-2120632 bp Feature: gene Location: 2121488-2122921 bp Ori: CRK57050.1 Feature: domain Description: RVT_N Location: 2121575-2121818 bp Feature: domain Description: RVT_N Location: 21 21 575-21 21 81 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2121872-2122520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 21 872-21 22520 bp Feature: domain Description: GIIM Note: maturase Location: 2122571-2122751 bp Feature: domain Description: GIIM Note: maturase Location: 21 22571 -21 22751 bp Feature: gene Location: 2123067-2123192 bp Feature: gene Location: 2123353-2123958 bp Ori: CRK57052.1 Feature: domain Description: Transposase_20 Location: 2123566-2123785 bp Feature: domain Description: Transposase_20 Location: 21 23566-21 23785 bp Feature: gene Location: 2824347-2824757 bp Feature: gene Location: 2825140-2827632 bp Ori: CRK57693.1 Feature: domain Description: flhA Location: 2825161-2825605 bp Feature: domain Description: flhA Location: 28251 61 -2825605 bp Feature: gene Location: 2827779-2828039 bp Ori: CRK57694.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2827857-2827977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2827857-2827977 bp Feature: gene Location: 2828131-2828325 bp Ori: CRK57695.1 Feature: domain Description: InsE Location: 2828143-2828317 bp Feature: domain Description: InsE Location: 28281 43-282831 7 bp Feature: gene Location: 2828322-2831435 bp Ori: CRK57696.1 Feature: domain Description: HTH_21 Location: 2828457-2828622 bp Feature: domain Description: HTH_21 Location: 2828457-2828622 bp Feature: domain Description: rve Location: 2828703-2829045 bp Feature: domain Description: rve Location: 2828703-2829045 bp Feature: domain Description: T7_EssCb_Firm Location: 2829087-2831031 bp Feature: domain Description: T7_EssCb_Firm Location: 2829087-2831 031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT QueC (pfam06508), RVT-G2Lb, pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Transposase_20 (pfam02371), flhA (PRK12792), InsE (COG2963), HTH_21 (pfam13276)
rve (pfam00665), T7_EssCb_Firm (TIGR03928)