myRT

myRT report for GCA_900078365.1_SPPYR_PRJEB13037v1

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Seq: LT598653.1 uncultured Sphingopyxis sp. isolate UC10 genome assembly, chromosome: SPPYR (4139859 bp)
Overview 1 RT 1: 2201385-2204761 bp Neighborhood of RT #1 [2201385, 2204850] SRAP RVT-GII HTH_Tnp_1 Tra5 Feature: gene Location: 2201385-2202041 bp Ori: SBV33189.1 Feature: domain Description: SRAP Location: 2201388-2201979 bp Feature: domain Description: SRAP Location: 2201 388-2201 979 bp Feature: gene Location: 2202060-2202401 bp Feature: gene Location: 2202661-2203728 bp Ori: SBV33191.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2203087-2203543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2203087-2203543 bp Feature: gene Location: 2203679-2203957 bp Ori: SBV33192.1 Feature: domain Description: HTH_Tnp_1 Location: 2203733-2203898 bp Feature: domain Description: HTH_Tnp_1 Location: 2203733-2203898 bp Feature: gene Location: 2203999-2204850 bp Ori: SBV33193.1 Feature: domain Description: Tra5 Location: 2204116-2204761 bp Feature: domain Description: Tra5 Location: 22041 1 6-2204761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SRAP (pfam02586), RVT-GII, HTH_Tnp_1 (pfam01527), Tra5 (COG2801)