myRT

myRT report for GCA_900092475.1_Ef_aus00233

Download annotations/find similar RTs

Seq: LT598663.1 Enterococcus faecium isolate Ef_aus00233 genome assembly, chromosome: 1 (2888087 bp)
Overview 1 RT 1: 636254-650212 bp 2 RT 2: 807410-811951 bp 3 RT 3: 2758534-2771279 bp Neighborhood of RT #1 [636254, 650430] FtsK HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA TcpE AAA_10 RVT-GII AAA_10 7tmA_5-HT1A_invertebrates 7tmA_5-HT1A_invertebrates Neighborhood of RT #2 [807410, 811959] RVT-GII Intron_maturas2 HNHc VirD4 Maff2 Neighborhood of RT #3 [2758534, 2771279] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA TcpE AAA_10 RVT-GII AAA_10 Feature: gene Location: 636254-637639 bp Feature: domain Description: FtsK Location: 636863-637496 bp Feature: domain Description: FtsK Location: 636863-637496 bp Feature: gene Location: 637817-639022 bp Feature: domain Description: HTH_XRE Location: 637862-638006 bp Feature: domain Description: HTH_XRE Location: 637862-638006 bp Feature: domain Description: Rol_Rep_N Location: 638033-638300 bp Feature: domain Description: Rol_Rep_N Location: 638033-638300 bp Feature: domain Description: Rep_trans Location: 638324-638933 bp Feature: domain Description: Rep_trans Location: 638324-638933 bp Feature: gene Location: 639806-641716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 640139-640877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6401 39-640877 bp Feature: domain Description: HNHc Note: nucleases Location: 641432-641597 bp Feature: domain Description: HNHc Note: nucleases Location: 641 432-641 597 bp Feature: gene Location: 641877-642044 bp Feature: gene Location: 642161-642658 bp Feature: domain Description: ArdA Location: 642179-642644 bp Feature: domain Description: ArdA Location: 6421 79-642644 bp Feature: gene Location: 642642-643139 bp Feature: domain Description: TcpE Location: 642765-643065 bp Feature: domain Description: TcpE Location: 642765-643065 bp Feature: gene Location: 643123-644676 bp Feature: domain Description: AAA_10 Location: 644455-644641 bp Feature: domain Description: AAA_1 0 Location: 644455-644641 bp Feature: gene Location: 645373-647199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 645673-646372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 645673-646372 bp Feature: gene Location: 647333-648250 bp Feature: domain Description: AAA_10 Location: 647339-648218 bp Feature: domain Description: AAA_1 0 Location: 647339-64821 8 bp Feature: gene Location: 648253-650430 bp Feature: domain Description: 7tmA_5-HT1A_invertebrates Location: 648556-648814 bp Feature: domain Description: 7tmA_5-HT1 A_invertebrates Location: 648556-64881 4 bp Feature: domain Description: 7tmA_5-HT1A_invertebrates Location: 649765-650212 bp Feature: domain Description: 7tmA_5-HT1 A_invertebrates Location: 649765-65021 2 bp Feature: gene Location: 807410-807910 bp Feature: gene Location: 808314-808463 bp Feature: gene Location: 808470-810287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 808734-809553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 808734-809553 bp Feature: domain Description: Intron_maturas2 Location: 809625-809928 bp Feature: domain Description: Intron_maturas2 Location: 809625-809928 bp Feature: domain Description: HNHc Note: nucleases Location: 810108-810252 bp Feature: domain Description: HNHc Note: nucleases Location: 81 01 08-81 0252 bp Feature: gene Location: 810378-811721 bp Feature: domain Description: VirD4 Location: 810420-811584 bp Feature: domain Description: VirD4 Location: 81 0420-81 1 584 bp Feature: gene Location: 811765-811959 bp Feature: domain Description: Maff2 Location: 811801-811951 bp Feature: domain Description: Maff2 Location: 81 1 801 -81 1 951 bp Feature: gene Location: 2758534-2758677 bp Feature: gene Location: 2758770-2759954 bp Feature: domain Description: HTH_XRE Location: 2758800-2758944 bp Feature: domain Description: HTH_XRE Location: 2758800-2758944 bp Feature: domain Description: Rol_Rep_N Location: 2758977-2759241 bp Feature: domain Description: Rol_Rep_N Location: 2758977-2759241 bp Feature: domain Description: Rep_trans Location: 2759265-2759877 bp Feature: domain Description: Rep_trans Location: 2759265-2759877 bp Feature: gene Location: 2760834-2762744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2761167-2761905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2761 1 67-2761 905 bp Feature: domain Description: HNHc Note: nucleases Location: 2762460-2762625 bp Feature: domain Description: HNHc Note: nucleases Location: 2762460-2762625 bp Feature: gene Location: 2762932-2763072 bp Feature: gene Location: 2763085-2763588 bp Feature: domain Description: ArdA Location: 2763103-2763574 bp Feature: domain Description: ArdA Location: 27631 03-2763574 bp Feature: gene Location: 2763648-2764037 bp Feature: domain Description: TcpE Location: 2763666-2763966 bp Feature: domain Description: TcpE Location: 2763666-2763966 bp Feature: gene Location: 2764024-2765574 bp Feature: domain Description: AAA_10 Location: 2765353-2765536 bp Feature: domain Description: AAA_1 0 Location: 2765353-2765536 bp Feature: gene Location: 2766271-2768097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2766571-2767270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2766571 -2767270 bp Feature: gene Location: 2768231-2769151 bp Feature: domain Description: AAA_10 Location: 2768237-2769116 bp Feature: domain Description: AAA_1 0 Location: 2768237-27691 1 6 bp Feature: gene Location: 2769156-2771279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275), TcpE (pfam12648), AAA_10 (pfam12846), 7tmA_5-HT1A_invertebrates (cd15331)
Intron_maturas2 (pfam01348), VirD4 (COG3505), Maff2 (pfam12750)

Seq: LT598664.1 Enterococcus faecium isolate Ef_aus00233 genome assembly, plasmid: 2 (197153 bp)
Overview 1 RT 1: 147324-157113 bp Neighborhood of RT #1 [147324, 157113] TraG-D_C RVT-GII HNH_4 VirD4 VirD4 Feature: gene Location: 147324-149696 bp Feature: gene Location: 149693-150484 bp Feature: domain Description: TraG-D_C Location: 149696-150002 bp Feature: domain Description: TraG-D_C Location: 149696-150002 bp Feature: gene Location: 150610-152526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150949-151684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150949-151684 bp Feature: domain Description: HNH_4 Location: 152278-152383 bp Feature: domain Description: HNH_4 Location: 152 2 78-152 383 bp Feature: gene Location: 153221-155050 bp Feature: domain Description: VirD4 Location: 153632-154475 bp Feature: domain Description: VirD4 Location: 153632 -154475 bp Feature: domain Description: VirD4 Location: 154862-155024 bp Feature: domain Description: VirD4 Location: 154862 -15502 4 bp Feature: gene Location: 155050-157113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT-GII, HNH_4 (pfam13395), VirD4 (COG3505)