myRT

myRT report for GCA_900092615.1_PRJEB14041

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Seq: LT601384.1 Escherichia coli isolate NCTC86EC genome assembly, chromosome: I (5144250 bp)
Overview 1 RT 1: 2939498-2943902 bp 2 RT 2: 4790961-4796280 bp Neighborhood of RT #1 [2939498, 2943934] InsE PHA02517 RVT-GII GIIM PHA02517 QdoI Neighborhood of RT #2 [4790961, 4796306] YesM RVT-GII GIIM RVT-GII PFLE_PFLC Feature: gene Location: 2939498-2939824 bp Ori: SCA72316.1 Feature: domain Description: InsE Location: 2939501-2939822 bp Feature: domain Description: InsE Location: 2939501 -2939822 bp Feature: gene Location: 2939824-2940303 bp Ori: SCA72317.1 Feature: domain Description: PHA02517 Location: 2939884-2940238 bp Feature: domain Description: PHA0251 7 Location: 2939884-2940238 bp Feature: gene Location: 2940895-2942418 bp Ori: SCA72318.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2941168-2941900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2941 1 68-2941 900 bp Feature: domain Description: GIIM Note: maturase Location: 2941975-2942173 bp Feature: domain Description: GIIM Note: maturase Location: 2941 975-29421 73 bp Feature: gene Location: 2942610-2942981 bp Ori: SCA72319.1 Feature: domain Description: PHA02517 Location: 2942613-2942979 bp Feature: domain Description: PHA0251 7 Location: 294261 3-2942979 bp Feature: gene Location: 2943584-2943934 bp Ori: SCA72320.1 Feature: domain Description: QdoI Location: 2943650-2943902 bp Feature: domain Description: QdoI Location: 2943650-2943902 bp Feature: gene Location: 4790961-4792190 bp Ori: SCA74038.1 Feature: domain Description: YesM Location: 4791441-4792182 bp Feature: domain Description: YesM Location: 4791 441 -47921 82 bp Feature: gene Location: 4792263-4792451 bp Feature: gene Location: 4792773-4793255 bp Ori: SCA74040.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4792782-4793022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4792782-4793022 bp Feature: domain Description: GIIM Note: maturase Location: 4793070-4793250 bp Feature: domain Description: GIIM Note: maturase Location: 4793070-4793250 bp Feature: gene Location: 4793322-4793861 bp Ori: SCA74041.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4793652-4793730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4793652-4793730 bp Feature: gene Location: 4794347-4795252 bp Feature: gene Location: 4795389-4796306 bp Ori: SCA74043.1 Feature: domain Description: PFLE_PFLC Location: 4795425-4796280 bp Feature: domain Description: PFLE_PFLC Location: 4795425-4796280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), QdoI (COG1917), YesM (COG2972), PFLE_PFLC (TIGR02494)