myRT

myRT report for GCA_900095805.1_PA14Or

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Seq: LT608330.1 Pseudomonas aeruginosa isolate PA14Or_reads genome assembly, chromosome: PA14OR (6541482 bp)
Overview 1 RT 1: 638738-649043 bp Neighborhood of RT #1 [638738, 649045] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 638738-639859 bp Ori: SCM60470.1 Feature: domain Description: COG3177 Location: 638756-639848 bp Feature: domain Description: COG31 77 Location: 638756-639848 bp Feature: gene Location: 640118-640279 bp Feature: gene Location: 640582-642267 bp Ori: SCM60472.1 Feature: domain Description: RVT_N Location: 640639-640879 bp Feature: domain Description: RVT_N Location: 640639-640879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 640927-641563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 640927-641 563 bp Feature: domain Description: GIIM Note: maturase Location: 641617-641848 bp Feature: domain Description: GIIM Note: maturase Location: 641 61 7-641 848 bp Feature: domain Description: HNH Note: nucleases Location: 642100-642238 bp Feature: domain Description: HNH Note: nucleases Location: 6421 00-642238 bp Feature: gene Location: 643348-647085 bp Ori: SCM60473.1 Feature: domain Description: PBP2_BvgS_HisK_like Location: 643456-644113 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 643456-6441 1 3 bp Feature: domain Description: PRK09776 Location: 644326-644797 bp Feature: domain Description: PRK09776 Location: 644326-644797 bp Feature: domain Description: PAS Location: 644842-645379 bp Feature: domain Description: PAS Location: 644842-645379 bp Feature: domain Description: PRK10060 Location: 645388-647035 bp Feature: domain Description: PRK1 0060 Location: 645388-647035 bp Feature: gene Location: 647192-649045 bp Ori: SCM60474.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 647204-649043 bp Feature: domain Description: PRK05658 Location: 647204-649043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)