myRT

myRT report for GCA_900095885.1_Daq1742

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Seq: LT615367.1 Dickeya aquatica strain 174/2 genome assembly, chromosome: Chromosome (4501560 bp)
Overview 1 RT 1: 174608-180071 bp 2 RT 2: 3731082-3735772 bp Neighborhood of RT #1 [174608, 180112] RVT-Retrons HTH_Tnp_1 Tra5 Neighborhood of RT #2 [3731082, 3735786] PRK09010 RVT-GII Intron_maturas2 HNHc Flavin_Reduct CC3_like_SDR_a Feature: gene Location: 174608-175735 bp Feature: gene Location: 176327-176644 bp Feature: gene Location: 176659-178005 bp Ori: SLM61300.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 176788-177406 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 76788-1 77406 bp Feature: gene Location: 178992-179255 bp Ori: SLM61301.1 Feature: domain Description: HTH_Tnp_1 Location: 178998-179202 bp Feature: domain Description: HTH_Tnp_1 Location: 1 78998-1 79202 bp Feature: gene Location: 179288-180112 bp Ori: SLM61302.1 Feature: domain Description: Tra5 Location: 179306-180071 bp Feature: domain Description: Tra5 Location: 1 79306-1 80071 bp Feature: gene Location: 3731082-3731207 bp Feature: gene Location: 3731242-3731802 bp Ori: SLM64532.1 Gene: ssb Feature: domain Description: PRK09010 Location: 3731245-3731800 bp Feature: domain Description: PRK0901 0 Location: 3731 245-3731 800 bp Feature: gene Location: 3732417-3734297 bp Ori: SLM64533.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3732705-3733542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3732705-3733542 bp Feature: domain Description: Intron_maturas2 Location: 3733653-3733932 bp Feature: domain Description: Intron_maturas2 Location: 3733653-3733932 bp Feature: domain Description: HNHc Note: nucleases Location: 3734073-3734250 bp Feature: domain Description: HNHc Note: nucleases Location: 3734073-3734250 bp Feature: gene Location: 3734444-3735022 bp Ori: SLM64534.1 Gene: yddH Feature: domain Description: Flavin_Reduct Location: 3734498-3734927 bp Feature: domain Description: Flavin_Reduct Location: 3734498-3734927 bp Feature: gene Location: 3735064-3735786 bp Ori: SLM64535.1 Feature: domain Description: CC3_like_SDR_a Location: 3735166-3735772 bp Feature: domain Description: CC3_like_SDR_a Location: 37351 66-3735772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_Tnp_1 (pfam01527), Tra5 (COG2801), PRK09010 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Flavin_Reduct (smart00903), CC3_like_SDR_a (cd05250)