myRT report for GCA_900116935.1_Chromosome
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Seq: LT630287.1 Lactobacillus acidipiscis strain ACA-DC 1533 genome assembly, chromosome: I (2607423 bp)
Associated domains:myRT
| rplI (PRK00137) | , PRK05748 (replicative DNA helicase; Provisional) | , RVT-GII | , GIIM (pfam08388) | , DDE_Tnp_1_4 (pfam13701) | , PhnD (TIGR03431) | , PLN02526 (acyl-coenzyme A oxidase) | , COG3464 (Transposase ) | , LysR (COG0583) | , PRK05790 (putative acyltransferase; Provisional) |
PRK01117 (adenylosuccinate synthetase; Provisional), LbH_MAT_GAT (cd03357) | , KOG4144 (KOG4144, Arylalkylamine N-acetyltransferase ) | , EIID-AGA (TIGR00828) | , trehalose_treC (TIGR02403) | , GATase1_DJ-1 (cd03135) | , DegV (TIGR00762) | , PepD (COG4690) | , PRK06935 (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD) | , Lpd (COG1249) |
DUF4096 (pfam13340), DDE_Tnp_1 (pfam01609) | , Fe-S_biosyn (pfam01521) | , ARO8 (COG1167) | , proV (TIGR01186) | , OpuBB (COG1174) | , PRK02363 (DNA-directed RNA polymerase subunit delta; Reviewed) | , pyrG (PRK05380) | , UPF0236 (pfam06782) | , SrmB (COG0513) |
COG3293 (Transposase ), PRK13962 (bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional) | , tpiA (PRK00042) | , secG (TIGR00810) | , smpB (TIGR00086) | , YxjI (COG4894) | , HAD_Pase (cd16418) | , Usp (pfam00582) | , NTP_transf_6 (pfam06042) | , PRK00180 (acetate kinase A/propionate kinase 2; Reviewed) |
rpmG (PRK00595), MTHFS_bact | , KOG2289 (KOG2289, Rhomboid family proteins ) | , Tra8 (COG2826) | , PRK05480 (uridine/cytidine kinase; Provisional) | , greA (TIGR01462) | , NfsA_FRP | , NIF3 (pfam01784) | , peptidase-T (TIGR01882) | , chaperone_ClpB (TIGR03346) |
DUF2929 (pfam11151), DnaE (COG0587) | , EbsA | , RlmL (COG0116) | , PRK14127 (cell division regulator GpsB) | , PRK13660 (hypothetical protein; Provisional) | , Peptidase_C69 (pfam03577) | , metallo-hydrolase-like_MBL-fold (cl23716) | , tsf (TIGR00116) | , rpsB (PRK12311) |
DDE_Tnp_ISL3 (pfam01610), yhbS (COG3153) | , MurE (COG0769) | , COG3442 (Glutamine amidotransferase related to the GATase domain of CobQ ) | , ManA (COG1482) | , DDE_Tnp_1_3 (pfam13612) | , PRK14822 (XTP/dITP diphosphatase) | , DUF2507 (pfam10702) | , PRK00409 (recombination and DNA strand exchange inhibitor protein; Reviewed) | , Colicin_V (pfam02674) |
CutC (pfam03932), PRK05270 (UDP-glucose--hexose-1-phosphate uridylyltransferase) | , PRK05322 (galactokinase; Provisional) | , ZnMc_MMP_like (cd04268) | , ptsS_2 (TIGR02136) | , DUF4828 (pfam16110) | , Mrr_cat (pfam04471) | , Abi_C (pfam14355) | , rpsL (PRK05163) | , DiS_P_DiS (pfam06750) |
Peptidase_A24 (pfam01478), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional) | , rpoB (TIGR02013) | , UreE_C (pfam05194) | , Ape1-like_AP-endo (cd09087) | , LZ_Tnp_IS66 (pfam13007) | , zf-IS66 (pfam13005) | , DDE_Tnp_IS66 (pfam03050) | , DDE_Tnp_IS66_C (pfam13817) | , TnpB_IS66 (pfam05717) |
FliD (COG1345), FlaG (pfam03646) | , PRK12804 (flagellin; Provisional) | , KxYKxGKxW (TIGR03715) | , COG5263 (Glucan-binding domain (YG repeat) ) | , glucan_65_rpt (TIGR04035) | , Glyco_hydro_70 (pfam02324) | , Metallophos_2 (pfam12850) | , YdcF-like (cl00630) | , HTH_3 (pfam01381) |
Acetyltransf_CG (pfam14542), pyruv_oxi_spxB (TIGR02720) | , PBP2_GlnP (cd13619) | , HisM (COG0765) | , Thia_YuaJ (pfam09515) | , EcfT (COG0619) | , GlcN6P_deaminase (cd01399) | , PRK00331 (isomerizing glutamine--fructose-6-phosphate transaminase) | , RTPR (TIGR02505) | , PduO_Nterm (TIGR00636) |
Acyl_transf_3 (pfam01757), PRK15057 (UDP-glucose 6-dehydrogenase; Provisional) | , benzyl_alcohol_DH (cd08278) |
