myRT

myRT report for GCA_900119705.1_PRJEB14245

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Seq: LT632322.1 Murdochiella sp. Marseille-P2341 strain Marseille-P2341T genome assembly, chromosome: contig00001 (1671491 bp)
Overview 1 RT 1: 430476-434941 bp 2 RT 2: 505081-509844 bp Neighborhood of RT #1 [430476, 434941] SSB_OBF Maff2 RVT-GII HNHc Neighborhood of RT #2 [505081, 509876] SSB_OBF Maff2 RVT-GII HNHc IME4 Feature: gene Location: 430476-430787 bp Feature: domain Description: SSB_OBF Location: 430560-430746 bp Feature: domain Description: SSB_OBF Location: 430560-430746 bp Feature: gene Location: 430791-430922 bp Feature: domain Description: Maff2 Location: 430794-430920 bp Feature: domain Description: Maff2 Location: 430794-430920 bp Feature: gene Location: 431644-433527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431977-432715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 977-43271 5 bp Feature: domain Description: HNHc Note: nucleases Location: 433261-433411 bp Feature: domain Description: HNHc Note: nucleases Location: 433261 -43341 1 bp Feature: gene Location: 433797-434660 bp Feature: gene Location: 434675-434941 bp Feature: gene Location: 505081-505392 bp Feature: domain Description: SSB_OBF Location: 505105-505324 bp Feature: domain Description: SSB_OBF Location: 5051 05-505324 bp Feature: gene Location: 505394-505525 bp Feature: domain Description: Maff2 Location: 505397-505523 bp Feature: domain Description: Maff2 Location: 505397-505523 bp Feature: gene Location: 506247-508130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 506580-507318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 506580-50731 8 bp Feature: domain Description: HNHc Note: nucleases Location: 507864-508014 bp Feature: domain Description: HNHc Note: nucleases Location: 507864-50801 4 bp Feature: gene Location: 508466-509317 bp Feature: gene Location: 509328-509876 bp Feature: domain Description: IME4 Location: 509340-509844 bp Feature: domain Description: IME4 Location: 509340-509844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSB_OBF (cd04496), Maff2 (pfam12750), RVT-GII, HNHc (smart00507), IME4 (COG4725)