myRT

myRT report for GCA_900120165.1_PRJEB15652

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Seq: LT635475.1 Ezakiella sp. Marseille-P2951 strain Marseille-P2951T genome assembly, chromosome: contig00001 (1741785 bp)
Overview 1 RT 1: 1057161-1061248 bp 2 RT 2: 1075375-1086601 bp Neighborhood of RT #1 [1057161, 1061313] Maff2 RVT-GII HNHc Maff2 SSB_OBF Neighborhood of RT #2 [1075375, 1086630] tRNA_anti-codon RVT_N RVT-GII GIIM PHA03411 COG4646 HELICc Cyt_C5_DNA_methylase Feature: gene Location: 1057161-1058024 bp Feature: gene Location: 1058026-1058172 bp Feature: domain Description: Maff2 Location: 1058077-1058167 bp Feature: domain Description: Maff2 Location: 1 058077-1 0581 67 bp Feature: gene Location: 1058276-1060144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1058606-1059341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 058606-1 059341 bp Feature: domain Description: HNHc Note: nucleases Location: 1059872-1060034 bp Feature: domain Description: HNHc Note: nucleases Location: 1 059872-1 060034 bp Feature: gene Location: 1060858-1060989 bp Feature: domain Description: Maff2 Location: 1060861-1060987 bp Feature: domain Description: Maff2 Location: 1 060861 -1 060987 bp Feature: gene Location: 1060990-1061313 bp Feature: domain Description: SSB_OBF Location: 1061017-1061248 bp Feature: domain Description: SSB_OBF Location: 1 061 01 7-1 061 248 bp Feature: gene Location: 1075375-1076031 bp Feature: domain Description: tRNA_anti-codon Location: 1075756-1075855 bp Feature: domain Description: tRNA_anti-codon Location: 1 075756-1 075855 bp Feature: gene Location: 1076075-1077403 bp Feature: gene Location: 1077537-1079207 bp Feature: domain Description: RVT_N Location: 1077582-1077825 bp Feature: domain Description: RVT_N Location: 1 077582-1 077825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1077870-1078518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 077870-1 07851 8 bp Feature: domain Description: GIIM Note: maturase Location: 1078572-1078803 bp Feature: domain Description: GIIM Note: maturase Location: 1 078572-1 078803 bp Feature: gene Location: 1079763-1086059 bp Feature: domain Description: PHA03411 Location: 1082280-1082586 bp Feature: domain Description: PHA0341 1 Location: 1 082280-1 082586 bp Feature: domain Description: COG4646 Location: 1082901-1085565 bp Feature: domain Description: COG4646 Location: 1 082901 -1 085565 bp Feature: domain Description: HELICc Location: 1085613-1085979 bp Feature: domain Description: HELICc Location: 1 08561 3-1 085979 bp Feature: gene Location: 1086046-1086630 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 1086070-1086601 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 1 086070-1 086601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), RVT-GII, HNHc (smart00507), SSB_OBF (cd04496), tRNA_anti-codon (pfam01336), RVT_N (pfam13655), GIIM (pfam08388), PHA03411 (putative methyltransferase; Provisional), COG4646 (Adenine-specific DNA methylase, N12 class ), HELICc (smart00490)
Cyt_C5_DNA_methylase (cl30459)