myRT

myRT report for GCA_900120345.1_PRJEB18024

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Seq: LT635479.1 Eubacterium sp. Marseille-P3177 strain Marseille-P3177T genome assembly, chromosome: contig00001 (3500754 bp)
Overview 1 RT 1: 505029-508653 bp 2 RT 2: 547877-558721 bp Neighborhood of RT #1 [505029, 508685] RVT-GII GIIM DUF1836 PIN_LabA-like_N_1 LabA_like_C LabA_like_C Neighborhood of RT #2 [547877, 558721] LPD28 N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc COG4646 HELICc Feature: gene Location: 505029-505190 bp Feature: gene Location: 505318-505464 bp Feature: gene Location: 505502-506902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 505826-506450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 505826-506450 bp Feature: domain Description: GIIM Note: maturase Location: 506507-506723 bp Feature: domain Description: GIIM Note: maturase Location: 506507-506723 bp Feature: gene Location: 506977-507579 bp Feature: domain Description: DUF1836 Location: 507046-507361 bp Feature: domain Description: DUF1 836 Location: 507046-507361 bp Feature: gene Location: 507645-508685 bp Feature: domain Description: PIN_LabA-like_N_1 Location: 507783-508128 bp Feature: domain Description: PIN_LabA-like_N_1 Location: 507783-5081 28 bp Feature: domain Description: LabA_like_C Location: 508239-508425 bp Feature: domain Description: LabA_like_C Location: 508239-508425 bp Feature: domain Description: LabA_like_C Location: 508476-508653 bp Feature: domain Description: LabA_like_C Location: 508476-508653 bp Feature: gene Location: 547877-548233 bp Feature: domain Description: LPD28 Location: 547898-548189 bp Feature: domain Description: LPD28 Location: 547898-5481 89 bp Feature: gene Location: 548246-554026 bp Feature: domain Description: N6_Mtase Location: 551159-551777 bp Feature: domain Description: N6_Mtase Location: 551 1 59-551 777 bp Feature: domain Description: COG4646 Location: 551870-554012 bp Feature: domain Description: COG4646 Location: 551 870-55401 2 bp Feature: gene Location: 554602-556416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 554869-555685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 554869-555685 bp Feature: domain Description: Intron_maturas2 Location: 555754-556084 bp Feature: domain Description: Intron_maturas2 Location: 555754-556084 bp Feature: domain Description: HNHc Note: nucleases Location: 556234-556381 bp Feature: domain Description: HNHc Note: nucleases Location: 556234-556381 bp Feature: gene Location: 556413-558254 bp Feature: domain Description: COG4646 Location: 556524-556941 bp Feature: domain Description: COG4646 Location: 556524-556941 bp Feature: domain Description: HELICc Location: 556965-557355 bp Feature: domain Description: HELICc Location: 556965-557355 bp Feature: gene Location: 558353-558721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF1836 (pfam08876), PIN_LabA-like_N_1 (cd11297), LabA_like_C (cl14879), LPD28 (pfam18843), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), Intron_maturas2 (pfam01348), HNHc (smart00507)
HELICc (smart00490)