myRT

myRT report for GCA_900149915.1_EPEC-E2348_69-V2

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Seq: LT827011.1 Escherichia coli O127:H6 isolate EPEC E2348/69 variety 2 genome assembly, chromosome: 1 (4848621 bp)
Overview 1 RT 1: 1656472-1663481 bp 2 RT 2: 3944744-3948620 bp Neighborhood of RT #1 [1656472, 1663483] AAA_23 Smc RVT-Retrons HipA_Ec_like PRK09726 Neighborhood of RT #2 [3944744, 3948625] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 1656472-1657572 bp Feature: gene Location: 1658050-1659876 bp Ori: SLM06607.1 Feature: domain Description: AAA_23 Location: 1658104-1658839 bp Feature: domain Description: AAA_23 Location: 1 6581 04-1 658839 bp Feature: domain Description: Smc Location: 1659085-1659376 bp Feature: domain Description: Smc Location: 1 659085-1 659376 bp Feature: gene Location: 1660873-1661274 bp Ori: SLM06608.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1660975-1661218 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 660975-1 661 21 8 bp Feature: gene Location: 1661895-1663217 bp Ori: SLM06609.1 Gene: hipA Feature: domain Description: HipA_Ec_like Location: 1661958-1663194 bp Feature: domain Description: HipA_Ec_like Location: 1 661 958-1 6631 94 bp Feature: gene Location: 1663217-1663483 bp Ori: SLM06610.1 Gene: hipB Feature: domain Description: PRK09726 Location: 1663220-1663481 bp Feature: domain Description: PRK09726 Location: 1 663220-1 663481 bp Feature: gene Location: 3944744-3945199 bp Ori: SLM08729.1 Gene: dut Feature: domain Description: dut Location: 3944747-3945194 bp Feature: domain Description: dut Location: 3944747-39451 94 bp Feature: gene Location: 3945306-3945902 bp Ori: SLM08730.1 Gene: slmA Feature: domain Description: slmA Location: 3945312-3945888 bp Feature: domain Description: slmA Location: 394531 2-3945888 bp Feature: gene Location: 3945946-3946905 bp Ori: SLM08731.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3946081-3946630 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3946081 -3946630 bp Feature: gene Location: 3947202-3947843 bp Ori: SLM08732.1 Gene: pyrE Feature: domain Description: pyrE Location: 3947205-3947838 bp Feature: domain Description: pyrE Location: 3947205-3947838 bp Feature: gene Location: 3947909-3948625 bp Ori: SLM08733.1 Gene: rph Feature: domain Description: rph Location: 3947912-3948620 bp Feature: domain Description: rph Location: 394791 2-3948620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), Smc (COG1196), RVT-Retrons, HipA_Ec_like (cd17808), PRK09726 (type II toxin-antitoxin system antitoxin HipB), dut (TIGR00576), slmA (PRK09480), pyrE (TIGR00336), rph (PRK00173)