myRT

myRT report for GCA_900174635.1_WI2

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Seq: LT838200.1 Escherichia coli isolate WI2 isolate genome assembly, chromosome: WI2 (4812814 bp)
Overview 1 RT 1: 4177673-4182278 bp Neighborhood of RT #1 [4177673, 4182278] LacI PBP1_GntR RVT-GII GIIM RVT-GII Feature: gene Location: 4177673-4178704 bp Ori: SMB35217.1 Feature: domain Description: LacI Location: 4177715-4177850 bp Feature: domain Description: LacI Location: 41 7771 5-41 77850 bp Feature: domain Description: PBP1_GntR Location: 4177889-4178699 bp Feature: domain Description: PBP1 _GntR Location: 41 77889-41 78699 bp Feature: gene Location: 4178786-4178923 bp Feature: gene Location: 4179429-4180037 bp Ori: SMB35223.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4179432-4179795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 79432-41 79795 bp Feature: domain Description: GIIM Note: maturase Location: 4179843-4180035 bp Feature: domain Description: GIIM Note: maturase Location: 41 79843-41 80035 bp Feature: gene Location: 4180055-4180489 bp Ori: SMB35224.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4180247-4180463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 80247-41 80463 bp Feature: gene Location: 4181398-4181724 bp Feature: gene Location: 4181934-4182278 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacI (pfam00356), PBP1_GntR (cd01575), RVT-GII, GIIM (pfam08388)

Seq: LT838202.1 Escherichia coli isolate WI2 isolate genome assembly, plasmid: pWI2-OXA48 (62645 bp)
Overview 1 RT 1: 6431-10697 bp Neighborhood of RT #1 [6431, 10711] MazE PRK09812 RVT-GII PRK10276 umuC Feature: gene Location: 6431-6688 bp Ori: SMB39471.1 Feature: domain Description: MazE Location: 6440-6680 bp Feature: domain Description: MazE Location: 6440-6680 bp Feature: gene Location: 6690-7022 bp Ori: SMB39501.1 Feature: domain Description: PRK09812 Location: 6696-7017 bp Feature: domain Description: PRK09812 Location: 6696-7017 bp Feature: gene Location: 7139-8623 bp Ori: SMB39505.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7541-8231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7541-82 31 bp Feature: gene Location: 9024-9458 bp Ori: SMB39512.1 Feature: domain Description: PRK10276 Location: 9072-9435 bp Feature: domain Description: PRK102 76 Location: 9072 -9435 bp Feature: gene Location: 9407-10711 bp Ori: SMB39516.1 Feature: domain Description: umuC Location: 9452-10697 bp Feature: domain Description: umuC Location: 9452 -10697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MazE (COG2336), PRK09812 (type II toxin-antitoxin system ChpB family toxin), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)