myRT

myRT report for GCA_900231165.1_HDIA1

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Seq: LT960614.1 Hartmannibacter diazotrophicus strain E19T genome assembly, chromosome: 1 (5327443 bp)
Overview 1 RT 1: 3750238-3758326 bp 2 RT 2: 4159131-4165779 bp Neighborhood of RT #1 [3750238, 3758715] OafA RVT-UG13 GIY-YIG_unchar_3 PRK05298 Neighborhood of RT #2 [4159131, 4165805] GT4_PimA-like Polysacc_lyase RVT-Retrons HAD_CbbY-like HAD_PGPase Feature: gene Location: 3750238-3752289 bp Ori: SON57016.1 Gene: oatA_3 Feature: domain Description: OafA Location: 3750244-3751294 bp Feature: domain Description: OafA Location: 3750244-3751 294 bp Feature: gene Location: 3752631-3752918 bp Feature: gene Location: 3753329-3755131 bp Ori: SON57018.1 Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 3753728-3754196 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 3753728-37541 96 bp Feature: gene Location: 3755222-3755533 bp Ori: SON57019.1 Feature: domain Description: GIY-YIG_unchar_3 Location: 3755237-3755492 bp Feature: domain Description: GIY-YIG_unchar_3 Location: 3755237-3755492 bp Feature: gene Location: 3755818-3758715 bp Ori: SON57020.1 Gene: uvrB Feature: domain Description: PRK05298 Location: 3756355-3758326 bp Feature: domain Description: PRK05298 Location: 3756355-3758326 bp Feature: gene Location: 4159131-4160231 bp Ori: SON57392.1 Gene: kanE_1 Feature: domain Description: GT4_PimA-like Location: 4159137-4160199 bp Feature: domain Description: GT4_PimA-like Location: 41 591 37-41 601 99 bp Feature: gene Location: 4160445-4161488 bp Ori: SON57393.1 Feature: domain Description: Polysacc_lyase Location: 4160613-4161375 bp Feature: domain Description: Polysacc_lyase Location: 41 6061 3-41 61 375 bp Feature: gene Location: 4162349-4164112 bp Ori: SON57394.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4162484-4163111 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41 62484-41 631 1 1 bp Feature: gene Location: 4164463-4165152 bp Ori: SON57395.1 Feature: domain Description: HAD_CbbY-like Location: 4164478-4165057 bp Feature: domain Description: HAD_CbbY-like Location: 41 64478-41 65057 bp Feature: gene Location: 4165149-4165805 bp Ori: SON57396.1 Gene: cbbZC Feature: domain Description: HAD_PGPase Location: 4165158-4165779 bp Feature: domain Description: HAD_PGPase Location: 41 651 58-41 65779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OafA (COG1835), RVT-UG13, GIY-YIG_unchar_3 (cd10448), PRK05298 (excinuclease ABC subunit UvrB), GT4_PimA-like (cd03801), Polysacc_lyase (pfam14099), RVT-Retrons, HAD_CbbY-like (cd07528), HAD_PGPase (cd16421)