myRT

myRT report for GCA_900327265.1_Kato

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Seq: LS398550.1 Orientia tsutsugamushi isolate Kato genome assembly, chromosome: I (2319449 bp)
Overview 1 RT 1: 9476-14928 bp 2 RT 2: 22975-29800 bp 3 RT 3: 77674-90556 bp 4 RT 4: 93671-106296 bp 5 RT 5: 141661-148678 bp 6 RT 6: 163002-167523 bp 7 RT 7: 205761-210106 bp 8 RT 8: 226916-233109 bp 9 RT 9: 242827-247601 bp 10 RT 10: 270279-274024 bp 11 RT 11: 296036-300301 bp 12 RT 12: 412058-420096 bp 13 RT 13: 517750-521784 bp 14 RT 14: 526338-533182 bp 15 RT 15: 692443-705854 bp 16 RT 16: 760753-767697 bp 17 RT 17: 802128-809002 bp 18 RT 18: 926918-932910 bp 19 RT 19: 995629-1001772 bp 20 RT 20: 1011907-1014898 bp 21 RT 21: 1021087-1024407 bp 22 RT 22: 1162677-1168704 bp 23 RT 23: 1194965-1199682 bp 24 RT 24: 1206569-1210596 bp 25 RT 25: 1270881-1275159 bp 26 RT 26: 1351955-1356059 bp 27 RT 27: 1358793-1365449 bp 28 RT 28: 1371093-1373809 bp 29 RT 29: 1406339-1410013 bp 30 RT 30: 1462072-1468705 bp 31 RT 31: 1489885-1492692 bp 32 RT 32: 1541382-1547509 bp 33 RT 33: 1605679-1610914 bp 34 RT 34: 1679177-1683737 bp 35 RT 35: 1753493-1758620 bp 36 RT 36: 1777486-1785684 bp 37 RT 37: 1933873-1937472 bp 38 RT 38: 2176651-2185222 bp 39 RT 39: 2216091-2223677 bp 40 RT 40: 2227810-2239569 bp Neighborhood of RT #1 [9476, 14939] RVT-GII TraH PRK13723 Neighborhood of RT #2 [22975, 29910] TraA_Ti Toprim_3 TraA_Ti RVT_N RVT-GII GIIM HNHc TraD PDDEXK_2 fliH Neighborhood of RT #3 [77674, 90556] TRX_reduct PhrB RVT-GII Arm-DNA-bind_3 INT_Rci_Hp1_C DDE_Tnp_1_3 RVT-GII DDE_Tnp_4 Neighborhood of RT #4 [93671, 106296] TraD RVT_N RVT-GII GIIM HNHc TraA_Ti Toprim_3 ANK RVT-GII Neighborhood of RT #5 [141661, 148701] TraA_Ti Toprim_3 TraA_Ti RVT_N RVT-GII GIIM HNHc TraD PDDEXK_2 fliH T_den_put_tspse Neighborhood of RT #6 [163002, 167672] yajC SecD RVT-GII GIIM HTH_Tnp_IS630 HTH_Tnp_4 Neighborhood of RT #7 [205761, 210106] ExoIII-like_AP-endo RVT-GII Neighborhood of RT #8 [226916, 233117] TraD RVT_N RVT-GII GIIM HNHc TraA_Ti Bcp Neighborhood of RT #9 [242827, 247601] RVT-GII RVT-GII RVT-GII GIIM Neighborhood of RT #10 [270279, 274024] TraF RVT-GII TraH Neighborhood of RT #11 [296036, 300301] TraC-F-type TraN RVT-GII RVT-GII Neighborhood of RT #12 [412058, 420096] TraA_Ti TraA_Ti TraI_TIGR RVT_N RVT-GII GIIM HNHc TraD Neighborhood of RT #13 [517750, 521795] ANK ANK RVT-GII RVT-GII PRK11107 Neighborhood of RT #14 [526338, 533304] TraD RVT_N RVT-GII GIIM HNHc TraA_Ti Toprim_3 Neighborhood of RT #15 [692443, 705871] group_II_RT_mat RVT-GII Dam PRK10618 SpoT RVT-GII SpoT PDDEXK_2 fliH TraD RVT_N RVT-GII GIIM HNHc TraA_Ti TraA_Ti Neighborhood of RT #16 [760753, 767819] TraD RVT_N RVT-GII GIIM HNHc TraA_Ti Toprim_3 Neighborhood of RT #17 [802128, 809100] Toprim_3 TraA_Ti RVT_N RVT-GII GIIM HNHc TraD PDDEXK_2 fliH Neighborhood of RT #18 [926918, 933032] TraD RVT_N RVT-GII GIIM HNHc TraA_Ti Toprim_3 Neighborhood of RT #19 [995629, 1001772] TraA_Ti Toprim_3 TraA_Ti RVT_N RVT-GII GIIM HNHc TraD Neighborhood of RT #20 [1011907, 1014903] RVT-GII TraN TraN Neighborhood of RT #21 [1021087, 1024407] TraE RVT-GII Neighborhood of RT #22 [1162677, 1168826] TraD RVT_N RVT-GII GIIM HNHc TraA_Ti Toprim_3 Neighborhood of RT #23 [1194965, 1199682] ANK ANK RVT-GII GIIM Arm-DNA-bind_3 INT_Rci_Hp1_C Neighborhood of RT #24 [1206569, 1210766] PRK15000 RVT-GII Neighborhood of RT #25 [1270881, 1275159] TraE RVT-GII Arm-DNA-bind_3 INT_Rci_Hp1_C Neighborhood of RT #26 [1351955, 1356067] PRK14341 RVT-GII Dam Neighborhood of RT #27 [1358793, 1365571] TraD RVT_N RVT-GII GIIM HNHc TraA_Ti TraA_Ti Toprim_3 Neighborhood of RT #28 [1371093, 1373809] TraH RVT-GII Neighborhood of RT #29 [1406339, 1410013] PRK13723 TraH RVT-GII GIIM Neighborhood of RT #30 [1462072, 1468827] ExoIII-like_AP-endo TraD RVT_N RVT-GII GIIM HNHc TraA_Ti Toprim_3 Neighborhood of RT #31 [1489885, 1492763] RVT-GII UPF0093 hemH Neighborhood of RT #32 [1541382, 1547509] Toprim_3 TraA_Ti RVT_N RVT-GII GIIM HNHc TraD Neighborhood of RT #33 [1605679, 1611012] TraA_Ti TraA_Ti RVT_N RVT-GII GIIM HNHc TraD PDDEXK_2 fliH Neighborhood of RT #34 [1679177, 1683737] ANK ANK RVT-GII PRK13737 Neighborhood of RT #35 [1753493, 1758620] TraE RVT-GII Arm-DNA-bind_3 INT_Rci_Hp1_C Neighborhood of RT #36 [1777486, 1785710] CcmF CorB RVT-GII SodA sucA Neighborhood of RT #37 [1933873, 1937472] INT_Rci_Hp1_C RVT-GII TraH Neighborhood of RT #38 [2176651, 2185704] ANK ANK ANK PHA02878 TraD RVT_N RVT-GII GIIM HNHc TraA_Ti Toprim_3 TraA_Ti Neighborhood of RT #39 [2216091, 2223677] ANK ANK RVT-GII RVT-GII RVT-GII MidA Neighborhood of RT #40 [2227810, 2239577] Arm-DNA-bind_3 INT_Rci_Hp1_C RVT-GII RVT-GII SpoT TraD RVT_N RVT-GII GIIM HNHc TraA_Ti PRK07078 Toprim_3 TraI_TIGR Transposase_31 Feature: gene Location: 9476-11275 bp Feature: gene Location: 11748-11900 bp Feature: gene Location: 12085-13224 bp Ori: SPR02273.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12370-13054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2370-1 3054 bp Feature: gene Location: 13636-14265 bp Ori: SPR02278.1 Gene: traH Feature: domain Description: TraH Location: 13726-14245 bp Feature: domain Description: TraH Location: 1 3726-1 4245 bp Feature: gene Location: 14460-14939 bp Ori: SPR02286.1 Gene: traH Feature: domain Description: PRK13723 Location: 14475-14928 bp Feature: domain Description: PRK1 3723 Location: 1 4475-1 4928 bp Feature: gene Location: 22975-23799 bp Ori: SPR02330.1 Gene: traA Feature: domain Description: TraA_Ti Location: 23005-23164 bp Feature: domain Description: TraA_Ti Location: 23005-231 64 bp Feature: domain Description: Toprim_3 Location: 23455-23677 bp Feature: domain Description: Toprim_3 Location: 23455-23677 bp Feature: gene Location: 23814-25832 bp Ori: SPR02336.1 Gene: traA Feature: domain Description: TraA_Ti Location: 23835-25782 bp Feature: domain Description: TraA_Ti Location: 23835-25782 bp Feature: gene Location: 26512-28227 bp Ori: SPR02340.1 Feature: domain Description: RVT_N Location: 26569-26815 bp Feature: domain Description: RVT_N Location: 26569-2681 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26863-27508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26863-27508 bp Feature: domain Description: GIIM Note: maturase Location: 27580-27814 bp Feature: domain Description: GIIM Note: maturase Location: 27580-2781 4 bp Feature: domain Description: HNHc Note: nucleases Location: 28003-28168 bp Feature: domain Description: HNHc Note: nucleases Location: 28003-281 68 bp Feature: gene Location: 28494-28892 bp Ori: SPR02347.1 Feature: domain Description: TraD Location: 28521-28698 bp Feature: domain Description: TraD Location: 28521 -28698 bp Feature: gene Location: 28960-29910 bp Ori: SPR02351.1 Feature: domain Description: PDDEXK_2 Location: 28987-29677 bp Feature: domain Description: PDDEXK_2 Location: 28987-29677 bp Feature: domain Description: fliH Location: 29677-29800 bp Feature: domain Description: fliH Location: 29677-29800 bp Feature: gene Location: 77674-78636 bp Ori: SPR02617.1 Gene: trxB Feature: domain Description: TRX_reduct Location: 77701-78622 bp Feature: domain Description: TRX_reduct Location: 77701 -78622 bp Feature: gene Location: 78657-80168 bp Ori: SPR02625.1 Gene: phrB|phrB Feature: domain Description: PhrB Location: 78666-80130 bp Feature: domain Description: PhrB Location: 78666-801 30 bp Feature: gene Location: 81089-82228 bp Ori: SPR02630.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81374-82058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 374-82058 bp Feature: gene Location: 83053-84075 bp Ori: SPR02636.1 Feature: domain Description: Arm-DNA-bind_3 Location: 83086-83362 bp Feature: domain Description: Arm-DNA-bind_3 Location: 83086-83362 bp Feature: domain Description: INT_Rci_Hp1_C Location: 83722-83992 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 83722-83992 bp Feature: gene Location: 84494-84775 bp Ori: SPR02640.1 Feature: domain Description: DDE_Tnp_1_3 Location: 84602-84761 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 84602-84761 bp Feature: gene Location: 85819-86610 bp Feature: gene Location: 87390-87788 bp Feature: gene Location: 88353-89492 bp Ori: SPR02654.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88638-89322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88638-89322 bp Feature: gene Location: 90055-90429 bp Ori: SPR02658.1 Feature: domain Description: DDE_Tnp_4 Location: 90073-90373 bp Feature: domain Description: DDE_Tnp_4 Location: 90073-90373 bp Feature: gene Location: 90383-90556 bp Feature: gene Location: 93671-95236 bp Feature: gene Location: 95240-95647 bp Ori: SPR02710.1 Feature: domain Description: TraD Location: 95267-95444 bp Feature: domain Description: TraD Location: 95267-95444 bp Feature: gene Location: 95914-97629 bp Ori: SPR02714.1 Feature: domain Description: RVT_N Location: 95971-96217 bp Feature: domain Description: RVT_N Location: 95971 -9621 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96265-96910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96265-9691 0 bp Feature: domain Description: GIIM Note: maturase Location: 96982-97216 bp Feature: domain Description: GIIM Note: maturase Location: 96982-9721 6 bp Feature: domain Description: HNHc Note: nucleases Location: 97405-97570 bp Feature: domain Description: HNHc Note: nucleases Location: 97405-97570 bp Feature: gene Location: 98311-100326 bp Ori: SPR02725.1 Gene: traA Feature: domain Description: TraA_Ti Location: 98332-100276 bp Feature: domain Description: TraA_Ti Location: 98332-1 00276 bp Feature: gene Location: 100383-101138 bp Ori: SPR02729.1 Gene: traA Feature: domain Description: Toprim_3 Location: 100794-101016 bp Feature: domain Description: Toprim_3 Location: 1 00794-1 01 01 6 bp Feature: gene Location: 103056-103424 bp Ori: SPR02751.1 Gene: ank19 Feature: domain Description: ANK Location: 103110-103416 bp Feature: domain Description: ANK Location: 1 031 1 0-1 0341 6 bp Feature: gene Location: 103653-103871 bp Feature: gene Location: 104230-104448 bp Ori: SPR02762.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104236-104389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 04236-1 04389 bp Feature: gene Location: 105863-106117 bp Feature: gene Location: 106180-106296 bp Feature: gene Location: 141661-142458 bp Ori: SPR02922.1 Gene: traA Feature: domain Description: TraA_Ti Location: 141691-141847 bp Feature: domain Description: TraA_Ti Location: 1 41 691 -1 41 847 bp Feature: domain Description: Toprim_3 Location: 142105-142336 bp Feature: domain Description: Toprim_3 Location: 1 421 05-1 42336 bp Feature: gene Location: 142473-144491 bp Ori: SPR02926.1 Gene: traA Feature: domain Description: TraA_Ti Location: 142494-144441 bp Feature: domain Description: TraA_Ti Location: 1 42494-1 44441 bp Feature: gene Location: 145171-146886 bp Ori: SPR02929.1 Feature: domain Description: RVT_N Location: 145228-145474 bp Feature: domain Description: RVT_N Location: 1 45228-1 45474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145522-146167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 45522-1 461 67 bp Feature: domain Description: GIIM Note: maturase Location: 146239-146473 bp Feature: domain Description: GIIM Note: maturase Location: 1 46239-1 46473 bp Feature: domain Description: HNHc Note: nucleases Location: 146662-146827 bp Feature: domain Description: HNHc Note: nucleases Location: 1 46662-1 46827 bp Feature: gene Location: 147096-147551 bp Ori: SPR02933.1 Feature: domain Description: TraD Location: 147180-147357 bp Feature: domain Description: TraD Location: 1 471 80-1 47357 bp Feature: gene Location: 147619-148701 bp Ori: SPR02937.1 Feature: domain Description: PDDEXK_2 Location: 147646-148336 bp Feature: domain Description: PDDEXK_2 Location: 1 47646-1 48336 bp Feature: domain Description: fliH Location: 148360-148498 bp Feature: domain Description: fliH Location: 1 48360-1 48498 bp Feature: domain Description: T_den_put_tspse Location: 148534-148678 bp Feature: domain Description: T_den_put_tspse Location: 1 48534-1 48678 bp Feature: gene Location: 163002-163382 bp Ori: SPR03008.1 Gene: yajC Feature: domain Description: yajC Location: 163062-163359 bp Feature: domain Description: yajC Location: 1 63062-1 63359 bp Feature: gene Location: 163379-164941 bp Ori: SPR03011.1 Gene: secD Feature: domain Description: SecD Location: 163403-164903 bp Feature: domain Description: SecD Location: 1 63403-1 64903 bp Feature: gene Location: 165148-166476 bp Ori: SPR03016.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165433-166117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 65433-1 661 1 7 bp Feature: domain Description: GIIM Note: maturase Location: 166189-166408 bp Feature: domain Description: GIIM Note: maturase Location: 1 661 89-1 66408 bp Feature: gene Location: 166989-167162 bp Ori: SPR03020.1 Feature: domain Description: HTH_Tnp_IS630 Location: 167031-167142 bp Feature: domain Description: HTH_Tnp_IS630 Location: 1 67031 -1 671 42 bp Feature: gene Location: 167232-167672 bp Ori: SPR03024.1 Feature: domain Description: HTH_Tnp_4 Location: 167373-167523 bp Feature: domain Description: HTH_Tnp_4 Location: 1 67373-1 67523 bp Feature: gene Location: 205761-206555 bp Ori: SPR03218.1 Gene: xthA2 Feature: domain Description: ExoIII-like_AP-endo Location: 205776-206550 bp Feature: domain Description: ExoIII-like_AP-endo Location: 205776-206550 bp Feature: gene Location: 207045-207167 bp Feature: gene Location: 208146-209285 bp Ori: SPR03226.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208431-209115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208431 -2091 1 5 bp Feature: gene Location: 209470-209622 bp Feature: gene Location: 209825-210106 bp Feature: gene Location: 226916-228481 bp Feature: gene Location: 228485-228892 bp Ori: SPR03340.1 Feature: domain Description: TraD Location: 228512-228689 bp Feature: domain Description: TraD Location: 22851 2-228689 bp Feature: gene Location: 229159-230874 bp Ori: SPR03345.1 Feature: domain Description: RVT_N Location: 229216-229462 bp Feature: domain Description: RVT_N Location: 22921 6-229462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 229510-230155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22951 0-2301 55 bp Feature: domain Description: GIIM Note: maturase Location: 230227-230461 bp Feature: domain Description: GIIM Note: maturase Location: 230227-230461 bp Feature: domain Description: HNHc Note: nucleases Location: 230650-230815 bp Feature: domain Description: HNHc Note: nucleases Location: 230650-23081 5 bp Feature: gene Location: 231556-232542 bp Ori: SPR03349.1 Gene: traA Feature: domain Description: TraA_Ti Location: 231577-232501 bp Feature: domain Description: TraA_Ti Location: 231 577-232501 bp Feature: gene Location: 232647-233117 bp Ori: SPR03353.1 Feature: domain Description: Bcp Location: 232653-233109 bp Feature: domain Description: Bcp Location: 232653-2331 09 bp Feature: gene Location: 242827-243027 bp Feature: gene Location: 243160-243312 bp Feature: gene Location: 243497-244186 bp Ori: SPR03439.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243782-244181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243782-2441 81 bp Feature: gene Location: 244260-244637 bp Ori: SPR03443.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244263-244470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244263-244470 bp Feature: gene Location: 244935-245087 bp Feature: gene Location: 245452-246780 bp Ori: SPR03450.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245737-246421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245737-246421 bp Feature: domain Description: GIIM Note: maturase Location: 246493-246712 bp Feature: domain Description: GIIM Note: maturase Location: 246493-24671 2 bp Feature: gene Location: 246965-247117 bp Feature: gene Location: 247320-247601 bp Feature: gene Location: 270279-270926 bp Ori: SPR03603.1 Gene: TrbL/VirB6|trbG/virB9 Feature: domain Description: TraF Location: 270396-270879 bp Feature: domain Description: TraF Location: 270396-270879 bp Feature: gene Location: 271059-271211 bp Feature: gene Location: 271396-272535 bp Ori: SPR03608.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271681-272365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271 681 -272365 bp Feature: gene Location: 272947-273840 bp Ori: SPR03611.1 Gene: traH Feature: domain Description: TraH Location: 273037-273793 bp Feature: domain Description: TraH Location: 273037-273793 bp Feature: gene Location: 273794-274024 bp Feature: gene Location: 296036-296659 bp Ori: SPR03801.1 Gene: traC Feature: domain Description: TraC-F-type Location: 296042-296642 bp Feature: domain Description: TraC-F-type Location: 296042-296642 bp Feature: gene Location: 296725-297876 bp Ori: SPR03805.1 Gene: traN Feature: domain Description: TraN Location: 297322-297865 bp Feature: domain Description: TraN Location: 297322-297865 bp Feature: gene Location: 298171-298527 bp Ori: SPR03808.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298177-298360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2981 77-298360 bp Feature: gene Location: 298621-299310 bp Ori: SPR03812.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298906-299305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298906-299305 bp Feature: gene Location: 299495-299647 bp Feature: gene Location: 300071-300301 bp Feature: gene Location: 412058-412570 bp Ori: SPR04283.1 Gene: traI Feature: domain Description: TraA_Ti Location: 412148-412565 bp Feature: domain Description: TraA_Ti Location: 41 21 48-41 2565 bp Feature: gene Location: 412838-415705 bp Ori: SPR04286.1 Gene: traA Feature: domain Description: TraA_Ti Location: 412859-415058 bp Feature: domain Description: TraA_Ti Location: 41 2859-41 5058 bp Feature: domain Description: TraI_TIGR Location: 415391-415670 bp Feature: domain Description: TraI_TIGR Location: 41 5391 -41 5670 bp Feature: gene Location: 416390-418105 bp Ori: SPR04292.1 Feature: domain Description: RVT_N Location: 416447-416693 bp Feature: domain Description: RVT_N Location: 41 6447-41 6693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416741-417386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 6741 -41 7386 bp Feature: domain Description: GIIM Note: maturase Location: 417458-417692 bp Feature: domain Description: GIIM Note: maturase Location: 41 7458-41 7692 bp Feature: domain Description: HNHc Note: nucleases Location: 417881-418046 bp Feature: domain Description: HNHc Note: nucleases Location: 41 7881 -41 8046 bp Feature: gene Location: 418315-418773 bp Ori: SPR04296.1 Feature: domain Description: TraD Location: 418399-418576 bp Feature: domain Description: TraD Location: 41 8399-41 8576 bp Feature: gene Location: 418846-420096 bp Feature: gene Location: 517750-518394 bp Ori: SPR04719.1 Feature: domain Description: ANK Location: 517780-517999 bp Feature: domain Description: ANK Location: 51 7780-51 7999 bp Feature: domain Description: ANK Location: 518053-518368 bp Feature: domain Description: ANK Location: 51 8053-51 8368 bp Feature: gene Location: 518441-518614 bp Feature: gene Location: 518912-519289 bp Ori: SPR04727.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 518915-519122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 891 5-51 91 22 bp Feature: gene Location: 519363-520052 bp Ori: SPR04732.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519648-520047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 9648-520047 bp Feature: gene Location: 520563-520853 bp Feature: gene Location: 520983-521795 bp Ori: SPR04742.1 Gene: mrp Feature: domain Description: PRK11107 Location: 521232-521784 bp Feature: domain Description: PRK1 1 1 07 Location: 521 232-521 784 bp Feature: gene Location: 526338-527306 bp Feature: gene Location: 527376-527831 bp Ori: SPR04767.1 Feature: domain Description: TraD Location: 527460-527637 bp Feature: domain Description: TraD Location: 527460-527637 bp Feature: gene Location: 528041-529756 bp Ori: SPR04771.1 Feature: domain Description: RVT_N Location: 528098-528344 bp Feature: domain Description: RVT_N Location: 528098-528344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 528392-529037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 528392-529037 bp Feature: domain Description: GIIM Note: maturase Location: 529109-529343 bp Feature: domain Description: GIIM Note: maturase Location: 5291 09-529343 bp Feature: domain Description: HNHc Note: nucleases Location: 529532-529697 bp Feature: domain Description: HNHc Note: nucleases Location: 529532-529697 bp Feature: gene Location: 530438-532453 bp Ori: SPR04775.1 Gene: traA Feature: domain Description: TraA_Ti Location: 530459-532403 bp Feature: domain Description: TraA_Ti Location: 530459-532403 bp Feature: gene Location: 532510-533304 bp Ori: SPR04779.1 Gene: traA Feature: domain Description: Toprim_3 Location: 532951-533182 bp Feature: domain Description: Toprim_3 Location: 532951 -5331 82 bp Feature: gene Location: 692443-692571 bp Feature: gene Location: 692921-693238 bp Ori: SPR05490.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 692927-693221 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 692927-693221 bp Feature: gene Location: 693338-694024 bp Ori: SPR05499.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 693623-694022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 693623-694022 bp Feature: gene Location: 694565-694846 bp Feature: gene Location: 694850-695659 bp Ori: SPR05509.1 Feature: domain Description: Dam Location: 694877-695651 bp Feature: domain Description: Dam Location: 694877-695651 bp Feature: gene Location: 696876-697634 bp Ori: SPR05519.1 Gene: mrp Feature: domain Description: PRK10618 Location: 696894-697623 bp Feature: domain Description: PRK1 061 8 Location: 696894-697623 bp Feature: gene Location: 697735-698040 bp Ori: SPR05522.1 Feature: domain Description: SpoT Location: 697765-697927 bp Feature: domain Description: SpoT Location: 697765-697927 bp Feature: gene Location: 698406-699545 bp Ori: SPR05526.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 698691-699375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 698691 -699375 bp Feature: gene Location: 699829-700236 bp Ori: SPR05530.1 Gene: relA|spoT Feature: domain Description: SpoT Location: 699853-700219 bp Feature: domain Description: SpoT Location: 699853-70021 9 bp Feature: gene Location: 700358-701320 bp Ori: SPR05535.1 Feature: domain Description: PDDEXK_2 Location: 700385-701075 bp Feature: domain Description: PDDEXK_2 Location: 700385-701 075 bp Feature: domain Description: fliH Location: 701093-701225 bp Feature: domain Description: fliH Location: 701 093-701 225 bp Feature: gene Location: 701388-701843 bp Ori: SPR05539.1 Feature: domain Description: TraD Location: 701472-701649 bp Feature: domain Description: TraD Location: 701 472-701 649 bp Feature: gene Location: 702051-703766 bp Ori: SPR05543.1 Feature: domain Description: RVT_N Location: 702108-702354 bp Feature: domain Description: RVT_N Location: 7021 08-702354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 702402-703047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 702402-703047 bp Feature: domain Description: GIIM Note: maturase Location: 703119-703353 bp Feature: domain Description: GIIM Note: maturase Location: 7031 1 9-703353 bp Feature: domain Description: HNHc Note: nucleases Location: 703542-703707 bp Feature: domain Description: HNHc Note: nucleases Location: 703542-703707 bp Feature: gene Location: 704448-704750 bp Ori: SPR05547.1 Gene: traA Feature: domain Description: TraA_Ti Location: 704469-704739 bp Feature: domain Description: TraA_Ti Location: 704469-704739 bp Feature: gene Location: 704780-705871 bp Ori: SPR05551.1 Gene: traA Feature: domain Description: TraA_Ti Location: 704786-705854 bp Feature: domain Description: TraA_Ti Location: 704786-705854 bp Feature: gene Location: 760753-760986 bp Ori: SPR05868.1 Feature: domain Description: TraD Location: 760837-760978 bp Feature: domain Description: TraD Location: 760837-760978 bp Feature: gene Location: 761032-762354 bp Feature: gene Location: 762595-764310 bp Ori: SPR05877.1 Feature: domain Description: RVT_N Location: 762652-762898 bp Feature: domain Description: RVT_N Location: 762652-762898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762946-763591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762946-763591 bp Feature: domain Description: GIIM Note: maturase Location: 763663-763897 bp Feature: domain Description: GIIM Note: maturase Location: 763663-763897 bp Feature: domain Description: HNHc Note: nucleases Location: 764086-764251 bp Feature: domain Description: HNHc Note: nucleases Location: 764086-764251 bp Feature: gene Location: 764992-767007 bp Ori: SPR05883.1 Gene: traA Feature: domain Description: TraA_Ti Location: 765013-766957 bp Feature: domain Description: TraA_Ti Location: 76501 3-766957 bp Feature: gene Location: 767064-767819 bp Ori: SPR05888.1 Gene: traA Feature: domain Description: Toprim_3 Location: 767475-767697 bp Feature: domain Description: Toprim_3 Location: 767475-767697 bp Feature: gene Location: 802128-802883 bp Ori: SPR06135.1 Gene: traA Feature: domain Description: Toprim_3 Location: 802539-802761 bp Feature: domain Description: Toprim_3 Location: 802539-802761 bp Feature: gene Location: 802940-804955 bp Ori: SPR06140.1 Gene: traA Feature: domain Description: TraA_Ti Location: 802961-804905 bp Feature: domain Description: TraA_Ti Location: 802961 -804905 bp Feature: gene Location: 805637-807352 bp Ori: SPR06145.1 Feature: domain Description: RVT_N Location: 805694-805940 bp Feature: domain Description: RVT_N Location: 805694-805940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805988-806633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805988-806633 bp Feature: domain Description: GIIM Note: maturase Location: 806705-806939 bp Feature: domain Description: GIIM Note: maturase Location: 806705-806939 bp Feature: domain Description: HNHc Note: nucleases Location: 807128-807293 bp Feature: domain Description: HNHc Note: nucleases Location: 8071 28-807293 bp Feature: gene Location: 807619-808017 bp Ori: SPR06151.1 Feature: domain Description: TraD Location: 807646-807823 bp Feature: domain Description: TraD Location: 807646-807823 bp Feature: gene Location: 808090-809100 bp Ori: SPR06155.1 Feature: domain Description: PDDEXK_2 Location: 808117-808807 bp Feature: domain Description: PDDEXK_2 Location: 8081 1 7-808807 bp Feature: domain Description: fliH Location: 808846-809002 bp Feature: domain Description: fliH Location: 808846-809002 bp Feature: gene Location: 926918-927061 bp Feature: gene Location: 927145-927600 bp Ori: SPR06794.1 Feature: domain Description: TraD Location: 927229-927406 bp Feature: domain Description: TraD Location: 927229-927406 bp Feature: gene Location: 927810-929525 bp Ori: SPR06797.1 Feature: domain Description: RVT_N Location: 927867-928113 bp Feature: domain Description: RVT_N Location: 927867-9281 1 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 928161-928806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9281 61 -928806 bp Feature: domain Description: GIIM Note: maturase Location: 928878-929112 bp Feature: domain Description: GIIM Note: maturase Location: 928878-9291 1 2 bp Feature: domain Description: HNHc Note: nucleases Location: 929301-929466 bp Feature: domain Description: HNHc Note: nucleases Location: 929301 -929466 bp Feature: gene Location: 930205-932220 bp Ori: SPR06802.1 Gene: traA Feature: domain Description: TraA_Ti Location: 930226-932170 bp Feature: domain Description: TraA_Ti Location: 930226-9321 70 bp Feature: gene Location: 932277-933032 bp Ori: SPR06806.1 Gene: traA Feature: domain Description: Toprim_3 Location: 932688-932910 bp Feature: domain Description: Toprim_3 Location: 932688-93291 0 bp Feature: gene Location: 995629-996453 bp Ori: SPR07214.1 Gene: traA Feature: domain Description: TraA_Ti Location: 995659-995818 bp Feature: domain Description: TraA_Ti Location: 995659-99581 8 bp Feature: domain Description: Toprim_3 Location: 996109-996331 bp Feature: domain Description: Toprim_3 Location: 9961 09-996331 bp Feature: gene Location: 996468-998486 bp Ori: SPR07220.1 Gene: traA Feature: domain Description: TraA_Ti Location: 996489-998436 bp Feature: domain Description: TraA_Ti Location: 996489-998436 bp Feature: gene Location: 999165-1000880 bp Ori: SPR07226.1 Feature: domain Description: RVT_N Location: 999222-999468 bp Feature: domain Description: RVT_N Location: 999222-999468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 999516-1000161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99951 6-1 0001 61 bp Feature: domain Description: GIIM Note: maturase Location: 1000233-1000467 bp Feature: domain Description: GIIM Note: maturase Location: 1 000233-1 000467 bp Feature: domain Description: HNHc Note: nucleases Location: 1000656-1000821 bp Feature: domain Description: HNHc Note: nucleases Location: 1 000656-1 000821 bp Feature: gene Location: 1001090-1001545 bp Ori: SPR07231.1 Feature: domain Description: TraD Location: 1001174-1001351 bp Feature: domain Description: TraD Location: 1 001 1 74-1 001 351 bp Feature: gene Location: 1001629-1001772 bp Feature: gene Location: 1011907-1012197 bp Feature: gene Location: 1012370-1012522 bp Feature: gene Location: 1012707-1013846 bp Ori: SPR07305.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1012992-1013676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 2992-1 01 3676 bp Feature: gene Location: 1014118-1014453 bp Ori: SPR07309.1 Gene: traN Feature: domain Description: TraN Location: 1014133-1014427 bp Feature: domain Description: TraN Location: 1 01 41 33-1 01 4427 bp Feature: gene Location: 1014490-1014903 bp Ori: SPR07315.1 Gene: traN Feature: domain Description: TraN Location: 1014700-1014898 bp Feature: domain Description: TraN Location: 1 01 4700-1 01 4898 bp Feature: gene Location: 1021087-1021329 bp Ori: SPR07365.1 Feature: domain Description: TraE Location: 1021093-1021288 bp Feature: domain Description: TraE Location: 1 021 093-1 021 288 bp Feature: gene Location: 1021402-1021725 bp Feature: gene Location: 1022044-1023183 bp Ori: SPR07375.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1022329-1023013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 022329-1 02301 3 bp Feature: gene Location: 1023787-1024044 bp Feature: gene Location: 1024282-1024407 bp Feature: gene Location: 1162677-1162820 bp Feature: gene Location: 1162904-1163359 bp Ori: SPR08178.1 Feature: domain Description: TraD Location: 1162988-1163165 bp Feature: domain Description: TraD Location: 1 1 62988-1 1 631 65 bp Feature: gene Location: 1163569-1165284 bp Ori: SPR08183.1 Feature: domain Description: RVT_N Location: 1163626-1163872 bp Feature: domain Description: RVT_N Location: 1 1 63626-1 1 63872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1163920-1164565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 63920-1 1 64565 bp Feature: domain Description: GIIM Note: maturase Location: 1164637-1164871 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 64637-1 1 64871 bp Feature: domain Description: HNHc Note: nucleases Location: 1165060-1165225 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 65060-1 1 65225 bp Feature: gene Location: 1165966-1167975 bp Ori: SPR08189.1 Gene: traA Feature: domain Description: TraA_Ti Location: 1165987-1167925 bp Feature: domain Description: TraA_Ti Location: 1 1 65987-1 1 67925 bp Feature: gene Location: 1168032-1168826 bp Ori: SPR08194.1 Gene: traA Feature: domain Description: Toprim_3 Location: 1168482-1168704 bp Feature: domain Description: Toprim_3 Location: 1 1 68482-1 1 68704 bp Feature: gene Location: 1194965-1195465 bp Ori: SPR08329.1 Feature: domain Description: ANK Location: 1194977-1195070 bp Feature: domain Description: ANK Location: 1 1 94977-1 1 95070 bp Feature: domain Description: ANK Location: 1195124-1195439 bp Feature: domain Description: ANK Location: 1 1 951 24-1 1 95439 bp Feature: gene Location: 1195512-1195601 bp Feature: gene Location: 1195709-1197037 bp Ori: SPR08339.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1195994-1196678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 95994-1 1 96678 bp Feature: domain Description: GIIM Note: maturase Location: 1196750-1196969 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 96750-1 1 96969 bp Feature: gene Location: 1197862-1198884 bp Ori: SPR08346.1 Feature: domain Description: Arm-DNA-bind_3 Location: 1197895-1198171 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1 1 97895-1 1 981 71 bp Feature: domain Description: INT_Rci_Hp1_C Location: 1198531-1198801 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 1 1 98531 -1 1 98801 bp Feature: gene Location: 1199224-1199682 bp Feature: gene Location: 1206569-1207171 bp Ori: SPR08384.1 Feature: domain Description: PRK15000 Location: 1206578-1207163 bp Feature: domain Description: PRK1 5000 Location: 1 206578-1 2071 63 bp Feature: gene Location: 1208556-1208945 bp Feature: gene Location: 1209627-1210766 bp Ori: SPR08393.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1209912-1210596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 20991 2-1 21 0596 bp Feature: gene Location: 1270881-1271123 bp Ori: SPR08691.1 Feature: domain Description: TraE Location: 1270887-1271082 bp Feature: domain Description: TraE Location: 1 270887-1 271 082 bp Feature: gene Location: 1271196-1271519 bp Feature: gene Location: 1271838-1272977 bp Ori: SPR08701.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1272123-1272807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2721 23-1 272807 bp Feature: gene Location: 1273803-1274825 bp Ori: SPR08706.1 Feature: domain Description: Arm-DNA-bind_3 Location: 1273842-1274112 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1 273842-1 2741 1 2 bp Feature: domain Description: INT_Rci_Hp1_C Location: 1274472-1274742 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 1 274472-1 274742 bp Feature: gene Location: 1274959-1275159 bp Feature: gene Location: 1351955-1352581 bp Ori: SPR09143.1 Gene: lplB Feature: domain Description: PRK14341 Location: 1351958-1352579 bp Feature: domain Description: PRK1 4341 Location: 1 351 958-1 352579 bp Feature: gene Location: 1353485-1353646 bp Feature: gene Location: 1353746-1354432 bp Ori: SPR09151.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1354031-1354430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 354031 -1 354430 bp Feature: gene Location: 1354973-1355254 bp Feature: gene Location: 1355258-1356067 bp Ori: SPR09162.1 Feature: domain Description: Dam Location: 1355285-1356059 bp Feature: domain Description: Dam Location: 1 355285-1 356059 bp Feature: gene Location: 1358793-1359596 bp Feature: gene Location: 1359655-1360110 bp Ori: SPR09184.1 Feature: domain Description: TraD Location: 1359739-1359916 bp Feature: domain Description: TraD Location: 1 359739-1 35991 6 bp Feature: gene Location: 1360319-1362034 bp Ori: SPR09190.1 Feature: domain Description: RVT_N Location: 1360376-1360622 bp Feature: domain Description: RVT_N Location: 1 360376-1 360622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1360670-1361315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 360670-1 361 31 5 bp Feature: domain Description: GIIM Note: maturase Location: 1361387-1361621 bp Feature: domain Description: GIIM Note: maturase Location: 1 361 387-1 361 621 bp Feature: domain Description: HNHc Note: nucleases Location: 1361810-1361975 bp Feature: domain Description: HNHc Note: nucleases Location: 1 361 81 0-1 361 975 bp Feature: gene Location: 1362714-1364732 bp Ori: SPR09197.1 Gene: traA Feature: domain Description: TraA_Ti Location: 1362735-1364682 bp Feature: domain Description: TraA_Ti Location: 1 362735-1 364682 bp Feature: gene Location: 1364747-1365571 bp Ori: SPR09202.1 Gene: traA Feature: domain Description: TraA_Ti Location: 1364777-1364936 bp Feature: domain Description: TraA_Ti Location: 1 364777-1 364936 bp Feature: domain Description: Toprim_3 Location: 1365227-1365449 bp Feature: domain Description: Toprim_3 Location: 1 365227-1 365449 bp Feature: gene Location: 1371093-1371323 bp Feature: gene Location: 1371277-1372170 bp Ori: SPR09236.1 Gene: traH Feature: domain Description: TraH Location: 1371367-1372123 bp Feature: domain Description: TraH Location: 1 371 367-1 3721 23 bp Feature: gene Location: 1372582-1373133 bp Ori: SPR09242.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372591-1372963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 372591 -1 372963 bp Feature: gene Location: 1373194-1373346 bp Feature: gene Location: 1373519-1373809 bp Feature: gene Location: 1406339-1406818 bp Ori: SPR09509.1 Gene: traH Feature: domain Description: PRK13723 Location: 1406351-1406807 bp Feature: domain Description: PRK1 3723 Location: 1 406351 -1 406807 bp Feature: gene Location: 1407013-1407642 bp Ori: SPR09514.1 Gene: traH Feature: domain Description: TraH Location: 1407103-1407619 bp Feature: domain Description: TraH Location: 1 4071 03-1 40761 9 bp Feature: gene Location: 1407864-1409192 bp Ori: SPR09519.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1408149-1408833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4081 49-1 408833 bp Feature: domain Description: GIIM Note: maturase Location: 1408905-1409124 bp Feature: domain Description: GIIM Note: maturase Location: 1 408905-1 4091 24 bp Feature: gene Location: 1409377-1409529 bp Feature: gene Location: 1409732-1410013 bp Feature: gene Location: 1462072-1462857 bp Ori: SPR09785.1 Gene: xthA2 Feature: domain Description: ExoIII-like_AP-endo Location: 1462075-1462846 bp Feature: domain Description: ExoIII-like_AP-endo Location: 1 462075-1 462846 bp Feature: gene Location: 1462899-1463354 bp Ori: SPR09790.1 Feature: domain Description: TraD Location: 1462983-1463160 bp Feature: domain Description: TraD Location: 1 462983-1 4631 60 bp Feature: gene Location: 1463564-1465279 bp Ori: SPR09795.1 Feature: domain Description: RVT_N Location: 1463621-1463867 bp Feature: domain Description: RVT_N Location: 1 463621 -1 463867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1463915-1464560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 46391 5-1 464560 bp Feature: domain Description: GIIM Note: maturase Location: 1464632-1464866 bp Feature: domain Description: GIIM Note: maturase Location: 1 464632-1 464866 bp Feature: domain Description: HNHc Note: nucleases Location: 1465055-1465220 bp Feature: domain Description: HNHc Note: nucleases Location: 1 465055-1 465220 bp Feature: gene Location: 1465961-1467976 bp Ori: SPR09800.1 Gene: traA Feature: domain Description: TraA_Ti Location: 1465982-1467926 bp Feature: domain Description: TraA_Ti Location: 1 465982-1 467926 bp Feature: gene Location: 1468033-1468827 bp Ori: SPR09806.1 Gene: traA Feature: domain Description: Toprim_3 Location: 1468483-1468705 bp Feature: domain Description: Toprim_3 Location: 1 468483-1 468705 bp Feature: gene Location: 1489885-1490022 bp Feature: gene Location: 1490331-1490459 bp Feature: gene Location: 1490641-1490868 bp Ori: SPR09983.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1490653-1490863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 490653-1 490863 bp Feature: gene Location: 1491286-1491720 bp Ori: SPR09988.1 Feature: domain Description: UPF0093 Location: 1491289-1491712 bp Feature: domain Description: UPF0093 Location: 1 491 289-1 491 71 2 bp Feature: gene Location: 1491729-1492763 bp Ori: SPR09993.1 Gene: hemH Feature: domain Description: hemH Location: 1491741-1492692 bp Feature: domain Description: hemH Location: 1 491 741 -1 492692 bp Feature: gene Location: 1541382-1542149 bp Ori: SPR10218.1 Gene: traA Feature: domain Description: Toprim_3 Location: 1541796-1542027 bp Feature: domain Description: Toprim_3 Location: 1 541 796-1 542027 bp Feature: gene Location: 1542206-1544221 bp Ori: SPR10223.1 Gene: traA Feature: domain Description: TraA_Ti Location: 1542227-1544171 bp Feature: domain Description: TraA_Ti Location: 1 542227-1 5441 71 bp Feature: gene Location: 1544903-1546618 bp Ori: SPR10228.1 Feature: domain Description: RVT_N Location: 1544960-1545206 bp Feature: domain Description: RVT_N Location: 1 544960-1 545206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1545254-1545899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 545254-1 545899 bp Feature: domain Description: GIIM Note: maturase Location: 1545971-1546205 bp Feature: domain Description: GIIM Note: maturase Location: 1 545971 -1 546205 bp Feature: domain Description: HNHc Note: nucleases Location: 1546394-1546559 bp Feature: domain Description: HNHc Note: nucleases Location: 1 546394-1 546559 bp Feature: gene Location: 1546827-1547282 bp Ori: SPR10233.1 Feature: domain Description: TraD Location: 1546911-1547088 bp Feature: domain Description: TraD Location: 1 54691 1 -1 547088 bp Feature: gene Location: 1547366-1547509 bp Feature: gene Location: 1605679-1606326 bp Ori: SPR10595.1 Gene: traA Feature: domain Description: TraA_Ti Location: 1605799-1606279 bp Feature: domain Description: TraA_Ti Location: 1 605799-1 606279 bp Feature: gene Location: 1606336-1606884 bp Ori: SPR10600.1 Gene: traA Feature: domain Description: TraA_Ti Location: 1606357-1606834 bp Feature: domain Description: TraA_Ti Location: 1 606357-1 606834 bp Feature: gene Location: 1607566-1609281 bp Ori: SPR10604.1 Feature: domain Description: RVT_N Location: 1607623-1607869 bp Feature: domain Description: RVT_N Location: 1 607623-1 607869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1607917-1608562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 60791 7-1 608562 bp Feature: domain Description: GIIM Note: maturase Location: 1608634-1608868 bp Feature: domain Description: GIIM Note: maturase Location: 1 608634-1 608868 bp Feature: domain Description: HNHc Note: nucleases Location: 1609057-1609222 bp Feature: domain Description: HNHc Note: nucleases Location: 1 609057-1 609222 bp Feature: gene Location: 1609548-1609946 bp Ori: SPR10610.1 Feature: domain Description: TraD Location: 1609575-1609752 bp Feature: domain Description: TraD Location: 1 609575-1 609752 bp Feature: gene Location: 1610014-1611012 bp Ori: SPR10616.1 Feature: domain Description: PDDEXK_2 Location: 1610041-1610731 bp Feature: domain Description: PDDEXK_2 Location: 1 61 0041 -1 61 0731 bp Feature: domain Description: fliH Location: 1610734-1610914 bp Feature: domain Description: fliH Location: 1 61 0734-1 61 091 4 bp Feature: gene Location: 1679177-1679830 bp Ori: SPR10939.1 Gene: ank13 Feature: domain Description: ANK Location: 1679189-1679423 bp Feature: domain Description: ANK Location: 1 6791 89-1 679423 bp Feature: domain Description: ANK Location: 1679555-1679786 bp Feature: domain Description: ANK Location: 1 679555-1 679786 bp Feature: gene Location: 1680308-1681390 bp Feature: gene Location: 1681551-1681877 bp Ori: SPR10948.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1681611-1681875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 681 61 1 -1 681 875 bp Feature: gene Location: 1682507-1683073 bp Ori: SPR10953.1 Gene: TrbL/VirB6|trbG/virB9 Feature: domain Description: PRK13737 Location: 1682528-1683065 bp Feature: domain Description: PRK1 3737 Location: 1 682528-1 683065 bp Feature: gene Location: 1683564-1683737 bp Feature: gene Location: 1753493-1753735 bp Ori: SPR11390.1 Feature: domain Description: TraE Location: 1753499-1753694 bp Feature: domain Description: TraE Location: 1 753499-1 753694 bp Feature: gene Location: 1753808-1754131 bp Feature: gene Location: 1754450-1755589 bp Ori: SPR11400.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1754735-1755419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 754735-1 75541 9 bp Feature: gene Location: 1756414-1757436 bp Ori: SPR11406.1 Feature: domain Description: Arm-DNA-bind_3 Location: 1756447-1756723 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1 756447-1 756723 bp Feature: domain Description: INT_Rci_Hp1_C Location: 1757083-1757353 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 1 757083-1 757353 bp Feature: gene Location: 1757844-1758620 bp Feature: gene Location: 1777486-1779348 bp Ori: SPR11519.1 Feature: domain Description: CcmF Location: 1777489-1779322 bp Feature: domain Description: CcmF Location: 1 777489-1 779322 bp Feature: gene Location: 1779338-1780606 bp Ori: SPR11523.1 Gene: mgtE Feature: domain Description: CorB Location: 1779350-1780583 bp Feature: domain Description: CorB Location: 1 779350-1 780583 bp Feature: gene Location: 1781867-1782037 bp Ori: SPR11529.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1781870-1782017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 781 870-1 78201 7 bp Feature: gene Location: 1782137-1782778 bp Ori: SPR11535.1 Gene: sodB Feature: domain Description: SodA Location: 1782176-1782767 bp Feature: domain Description: SodA Location: 1 7821 76-1 782767 bp Feature: gene Location: 1782819-1785710 bp Ori: SPR11540.1 Feature: domain Description: sucA Location: 1782840-1785684 bp Feature: domain Description: sucA Location: 1 782840-1 785684 bp Feature: gene Location: 1933873-1934244 bp Ori: SPR12328.1 Feature: domain Description: INT_Rci_Hp1_C Location: 1933879-1934164 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 1 933879-1 9341 64 bp Feature: gene Location: 1934507-1934659 bp Feature: gene Location: 1934844-1935983 bp Ori: SPR12337.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1935129-1935813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9351 29-1 93581 3 bp Feature: gene Location: 1936395-1937288 bp Ori: SPR12343.1 Gene: traH Feature: domain Description: TraH Location: 1936485-1937241 bp Feature: domain Description: TraH Location: 1 936485-1 937241 bp Feature: gene Location: 1937242-1937472 bp Feature: gene Location: 2176651-2178060 bp Ori: SPR13360.1 Gene: ank9 Feature: domain Description: ANK Location: 2176720-2176987 bp Feature: domain Description: ANK Location: 21 76720-21 76987 bp Feature: domain Description: ANK Location: 2177017-2177305 bp Feature: domain Description: ANK Location: 21 7701 7-21 77305 bp Feature: domain Description: ANK Location: 2177311-2177395 bp Feature: domain Description: ANK Location: 21 7731 1 -21 77395 bp Feature: domain Description: PHA02878 Location: 2177470-2178007 bp Feature: domain Description: PHA02878 Location: 21 77470-21 78007 bp Feature: gene Location: 2178262-2178717 bp Ori: SPR13362.1 Feature: domain Description: TraD Location: 2178346-2178523 bp Feature: domain Description: TraD Location: 21 78346-21 78523 bp Feature: gene Location: 2178927-2180642 bp Ori: SPR13364.1 Feature: domain Description: RVT_N Location: 2178984-2179230 bp Feature: domain Description: RVT_N Location: 21 78984-21 79230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2179278-2179923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 79278-21 79923 bp Feature: domain Description: GIIM Note: maturase Location: 2179995-2180229 bp Feature: domain Description: GIIM Note: maturase Location: 21 79995-21 80229 bp Feature: domain Description: HNHc Note: nucleases Location: 2180418-2180583 bp Feature: domain Description: HNHc Note: nucleases Location: 21 8041 8-21 80583 bp Feature: gene Location: 2181324-2184164 bp Ori: SPR13367.1 Gene: traA Feature: domain Description: TraA_Ti Location: 2181345-2183544 bp Feature: domain Description: TraA_Ti Location: 21 81 345-21 83544 bp Feature: domain Description: Toprim_3 Location: 2183838-2184054 bp Feature: domain Description: Toprim_3 Location: 21 83838-21 84054 bp Feature: gene Location: 2184442-2185704 bp Ori: SPR13369.1 Gene: traI Feature: domain Description: TraA_Ti Location: 2184535-2185222 bp Feature: domain Description: TraA_Ti Location: 21 84535-21 85222 bp Feature: gene Location: 2216091-2216735 bp Ori: SPR13450.1 Feature: domain Description: ANK Location: 2216121-2216340 bp Feature: domain Description: ANK Location: 221 61 21 -221 6340 bp Feature: domain Description: ANK Location: 2216394-2216709 bp Feature: domain Description: ANK Location: 221 6394-221 6709 bp Feature: gene Location: 2216782-2216955 bp Feature: gene Location: 2217253-2218392 bp Ori: SPR13456.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2217538-2218222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 7538-221 8222 bp Feature: gene Location: 2218916-2219182 bp Ori: SPR13458.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2219039-2219177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 9039-221 91 77 bp Feature: gene Location: 2219616-2219753 bp Feature: gene Location: 2220520-2220774 bp Feature: gene Location: 2221557-2221679 bp Ori: SPR13465.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2221563-2221677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2221 563-2221 677 bp Feature: gene Location: 2222263-2223417 bp Ori: SPR13467.1 Feature: domain Description: MidA Location: 2222266-2223355 bp Feature: domain Description: MidA Location: 2222266-2223355 bp Feature: gene Location: 2223462-2223677 bp Feature: gene Location: 2227810-2229009 bp Ori: SPR13483.1 Feature: domain Description: Arm-DNA-bind_3 Location: 2227840-2228104 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2227840-22281 04 bp Feature: domain Description: INT_Rci_Hp1_C Location: 2228449-2228929 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 2228449-2228929 bp Feature: gene Location: 2229272-2229424 bp Feature: gene Location: 2229609-2230298 bp Ori: SPR13488.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2229894-2230293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2229894-2230293 bp Feature: gene Location: 2230372-2230749 bp Ori: SPR13490.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2230375-2230582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2230375-2230582 bp Feature: gene Location: 2231223-2231441 bp Ori: SPR13492.1 Feature: domain Description: SpoT Location: 2231244-2231424 bp Feature: domain Description: SpoT Location: 2231 244-2231 424 bp Feature: gene Location: 2231528-2232073 bp Feature: gene Location: 2232162-2232617 bp Ori: SPR13496.1 Feature: domain Description: TraD Location: 2232246-2232423 bp Feature: domain Description: TraD Location: 2232246-2232423 bp Feature: gene Location: 2232827-2234542 bp Ori: SPR13499.1 Feature: domain Description: RVT_N Location: 2232884-2233130 bp Feature: domain Description: RVT_N Location: 2232884-22331 30 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2233178-2233823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22331 78-2233823 bp Feature: domain Description: GIIM Note: maturase Location: 2233895-2234129 bp Feature: domain Description: GIIM Note: maturase Location: 2233895-22341 29 bp Feature: domain Description: HNHc Note: nucleases Location: 2234318-2234483 bp Feature: domain Description: HNHc Note: nucleases Location: 223431 8-2234483 bp Feature: gene Location: 2235222-2239322 bp Ori: SPR13501.1 Gene: traI Feature: domain Description: TraA_Ti Location: 2235243-2237436 bp Feature: domain Description: TraA_Ti Location: 2235243-2237436 bp Feature: domain Description: PRK07078 Location: 2237484-2237769 bp Feature: domain Description: PRK07078 Location: 2237484-2237769 bp Feature: domain Description: Toprim_3 Location: 2238225-2238501 bp Feature: domain Description: Toprim_3 Location: 2238225-2238501 bp Feature: domain Description: TraI_TIGR Location: 2238678-2239272 bp Feature: domain Description: TraI_TIGR Location: 2238678-2239272 bp Feature: gene Location: 2239374-2239577 bp Ori: SPR13503.1 Feature: domain Description: Transposase_31 Location: 2239392-2239569 bp Feature: domain Description: Transposase_31 Location: 2239392-2239569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TraH (pfam06122), PRK13723 (conjugal transfer pilus assembly protein TraH; Provisional), TraA_Ti (TIGR02768), Toprim_3 (pfam13362), RVT_N (pfam13655), GIIM (pfam08388), HNHc (smart00507), TraD (pfam06412), PDDEXK_2 (pfam12784)
fliH (PRK13386), TRX_reduct (TIGR01292), PhrB (COG0415), Arm-DNA-bind_3 (pfam13356), INT_Rci_Hp1_C (cd00796), DDE_Tnp_1_3 (pfam13612), DDE_Tnp_4 (pfam13359), ANK (smart00248), T_den_put_tspse (TIGR01784), yajC (TIGR00739)
SecD (COG0342), HTH_Tnp_IS630 (pfam01710), HTH_Tnp_4 (pfam13613), ExoIII-like_AP-endo (cd09086), Bcp (COG1225), TraF (TIGR02739), TraC-F-type (TIGR02746), TraN (pfam06986), TraI_TIGR (TIGR02760), PRK11107 (hybrid sensory histidine kinase BarA; Provisional)
group_II_RT_mat (TIGR04416), Dam (pfam05869), PRK10618 (phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional), SpoT (COG0317), TraE (pfam05309), PRK15000 (peroxiredoxin C), PRK14341 (lipoyl(octanoyl) transferase LipB), UPF0093 (pfam03653), hemH (TIGR00109), PRK13737 (conjugal transfer pilus assembly protein TraU; Provisional)
CcmF (COG1138), CorB (COG4536), SodA (COG0605), sucA (PRK09404), PHA02878 (ankyrin repeat protein; Provisional), MidA (COG1565), PRK07078 (hypothetical protein; Validated), Transposase_31 (pfam04754)