myRT

myRT report for GCA_900465055.1_MORIYA_PRJEB24680v2

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Seq: LS483250.1 Moritella yayanosii strain DB21MT 5 genome assembly, chromosome: MORIYA (4433651 bp)
Overview 1 RT 1: 1163252-1167354 bp 2 RT 2: 1780650-1785700 bp Neighborhood of RT #1 [1163252, 1167354] FIDO RVT-GII GIIM COG3547 Neighborhood of RT #2 [1780650, 1785705] COG3950 RVT-Retrons copper_res_A Feature: gene Location: 1163252-1163863 bp Ori: SQD77596.1 Feature: domain Description: FIDO Location: 1163288-1163795 bp Feature: domain Description: FIDO Location: 1 1 63288-1 1 63795 bp Feature: gene Location: 1163853-1164011 bp Feature: gene Location: 1164202-1165491 bp Ori: SQD77598.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1164457-1165126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 64457-1 1 651 26 bp Feature: domain Description: GIIM Note: maturase Location: 1165219-1165411 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 6521 9-1 1 6541 1 bp Feature: gene Location: 1166187-1167179 bp Ori: SQD77599.1 Feature: domain Description: COG3547 Location: 1166214-1167126 bp Feature: domain Description: COG3547 Location: 1 1 6621 4-1 1 671 26 bp Feature: gene Location: 1167214-1167354 bp Feature: gene Location: 1780650-1780811 bp Feature: gene Location: 1780808-1782493 bp Ori: SQD78215.1 Feature: domain Description: COG3950 Location: 1781021-1782407 bp Feature: domain Description: COG3950 Location: 1 781 021 -1 782407 bp Feature: gene Location: 1782486-1783427 bp Ori: SQD78216.1 Gene: ret Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1782588-1783188 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 782588-1 7831 88 bp Feature: gene Location: 1783424-1783546 bp Feature: gene Location: 1783855-1785705 bp Ori: SQD78218.1 Feature: domain Description: copper_res_A Location: 1783879-1785700 bp Feature: domain Description: copper_res_A Location: 1 783879-1 785700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FIDO (COG2184), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, copper_res_A (TIGR01480)