myRT

myRT report for GCA_900474405.1_38109_G02

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Seq: LS483299.1 Mannheimia haemolytica strain NCTC10609 genome assembly, chromosome: 1 (2515193 bp)
Overview 1 RT 1: 403096-411663 bp 2 RT 2: 1898687-1903198 bp Neighborhood of RT #1 [403096, 411818] ECA_wecA PRK00062 RVT-UG2 PRK00566 Neighborhood of RT #2 [1898687, 1903200] PRK02101 GIIM HNHc RVT-GII RVT_N RVT-GII rpsI rplM Feature: gene Location: 403096-404160 bp Ori: SQE30100.1 Gene: wecA Feature: domain Description: ECA_wecA Location: 403108-404125 bp Feature: domain Description: ECA_wecA Location: 4031 08-4041 25 bp Feature: gene Location: 404302-405582 bp Ori: SQE30101.1 Gene: hemL Feature: domain Description: PRK00062 Location: 404308-405577 bp Feature: domain Description: PRK00062 Location: 404308-405577 bp Feature: gene Location: 406247-407140 bp Ori: SQE30102.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 406442-407111 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 406442-4071 1 1 bp Feature: gene Location: 407321-407431 bp Feature: gene Location: 407535-411818 bp Ori: SQE30104.1 Gene: rpoC Feature: domain Description: PRK00566 Location: 407571-411663 bp Feature: domain Description: PRK00566 Location: 407571 -41 1 663 bp Feature: gene Location: 1898687-1898944 bp Ori: SQE31751.1 Gene: yaaA_2 Feature: domain Description: PRK02101 Location: 1898711-1898939 bp Feature: domain Description: PRK021 01 Location: 1 89871 1 -1 898939 bp Feature: gene Location: 1899164-1899778 bp Ori: SQE31752.1 Feature: domain Description: GIIM Note: maturase Location: 1899176-1899359 bp Feature: domain Description: GIIM Note: maturase Location: 1 8991 76-1 899359 bp Feature: domain Description: HNHc Note: nucleases Location: 1899587-1899743 bp Feature: domain Description: HNHc Note: nucleases Location: 1 899587-1 899743 bp Feature: gene Location: 1899816-1900238 bp Ori: SQE31753.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1899822-1900188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 899822-1 9001 88 bp Feature: gene Location: 1900353-1900883 bp Ori: SQE31754.1 Gene: ltrA_2 Feature: domain Description: RVT_N Location: 1900422-1900665 bp Feature: domain Description: RVT_N Location: 1 900422-1 900665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1900710-1900878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 90071 0-1 900878 bp Feature: gene Location: 1902633-1903028 bp Ori: SQE31755.1 Gene: rpsI Feature: domain Description: rpsI Location: 1902645-1903026 bp Feature: domain Description: rpsI Location: 1 902645-1 903026 bp Feature: gene Location: 1903045-1903200 bp Ori: SQE31756.1 Gene: rplM_1 Feature: domain Description: rplM Location: 1903048-1903198 bp Feature: domain Description: rplM Location: 1 903048-1 9031 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), PRK02101 (peroxide stress protein YaaA), GIIM (pfam08388), HNHc (smart00507), RVT-GII, RVT_N (pfam13655), rpsI (PRK00132)
rplM (PRK09216)