myRT

myRT report for GCA_900474945.1_42017_E01

Download annotations/find similar RTs

Seq: LS483521.1 Streptococcus pyogenes strain NCTC8316 genome assembly, chromosome: 1 (1786462 bp)
Overview 1 RT 1: 810793-819545 bp 2 RT 2: 834332-838081 bp Neighborhood of RT #1 [810793, 819545] PrgI VirB4_CagE RVT_N RVT-GII GIIM Peptidase_M23 Phage_lysozyme2 PRK08581 Neighborhood of RT #2 [834332, 838081] MobC Relaxase RVT-GII Intron_maturas2 VirD2 Feature: gene Location: 810793-811146 bp Ori: SRX89161.1 Feature: domain Description: PrgI Location: 810805-811063 bp Feature: domain Description: PrgI Location: 81 0805-81 1 063 bp Feature: gene Location: 811103-812590 bp Ori: SRX89162.1 Feature: domain Description: VirB4_CagE Location: 811679-812318 bp Feature: domain Description: VirB4_CagE Location: 81 1 679-81 231 8 bp Feature: gene Location: 813119-814792 bp Ori: SRX89163.1 Gene: ltrA_1 Feature: domain Description: RVT_N Location: 813191-813431 bp Feature: domain Description: RVT_N Location: 81 31 91 -81 3431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 813479-814139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 3479-81 41 39 bp Feature: domain Description: GIIM Note: maturase Location: 814208-814427 bp Feature: domain Description: GIIM Note: maturase Location: 81 4208-81 4427 bp Feature: gene Location: 815762-818566 bp Ori: SRX89164.1 Feature: domain Description: Peptidase_M23 Location: 817208-817412 bp Feature: domain Description: Peptidase_M23 Location: 81 7208-81 741 2 bp Feature: domain Description: Phage_lysozyme2 Location: 817565-818075 bp Feature: domain Description: Phage_lysozyme2 Location: 81 7565-81 8075 bp Feature: domain Description: PRK08581 Location: 818192-818525 bp Feature: domain Description: PRK08581 Location: 81 81 92-81 8525 bp Feature: gene Location: 818910-819545 bp Feature: gene Location: 834332-834697 bp Ori: SRX89181.1 Feature: domain Description: MobC Location: 834518-834647 bp Feature: domain Description: MobC Location: 83451 8-834647 bp Feature: gene Location: 834684-835112 bp Ori: SRX89182.1 Feature: domain Description: Relaxase Location: 834717-835077 bp Feature: domain Description: Relaxase Location: 83471 7-835077 bp Feature: gene Location: 835649-837451 bp Ori: SRX89183.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 835925-836729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 835925-836729 bp Feature: domain Description: Intron_maturas2 Location: 836891-837116 bp Feature: domain Description: Intron_maturas2 Location: 836891 -8371 1 6 bp Feature: gene Location: 837650-837826 bp Ori: SRX89184.1 Feature: domain Description: VirD2 Location: 837653-837788 bp Feature: domain Description: VirD2 Location: 837653-837788 bp Feature: gene Location: 837887-838081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrgI (pfam12666), VirB4_CagE (TIGR00929), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), MobC (pfam05713), Relaxase (pfam03432)
Intron_maturas2 (pfam01348), VirD2 (COG3843)