myRT

myRT report for GCA_900474985.1_41965_C01

Download annotations/find similar RTs

Seq: LS483339.1 Streptococcus thermophilus strain NCTC12958 genome assembly, chromosome: 1 (2102271 bp)
Overview 1 RT 1: 168171-178360 bp Neighborhood of RT #1 [168171, 178360] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 168171-168722 bp Feature: gene Location: 168771-174233 bp Ori: SQF24032.1 Feature: domain Description: N6_Mtase Location: 170784-171375 bp Feature: domain Description: N6_Mtase Location: 1 70784-1 71 375 bp Feature: domain Description: COG4646 Location: 171966-174090 bp Feature: domain Description: COG4646 Location: 1 71 966-1 74090 bp Feature: gene Location: 174731-176509 bp Ori: SQF24033.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174992-175784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 74992-1 75784 bp Feature: domain Description: Intron_maturas2 Location: 175889-176120 bp Feature: domain Description: Intron_maturas2 Location: 1 75889-1 761 20 bp Feature: domain Description: HNHc Note: nucleases Location: 176285-176471 bp Feature: domain Description: HNHc Note: nucleases Location: 1 76285-1 76471 bp Feature: gene Location: 176647-177990 bp Ori: SQF24034.1 Feature: domain Description: KOG1000 Location: 176926-177241 bp Feature: domain Description: KOG1 000 Location: 1 76926-1 77241 bp Feature: gene Location: 178061-178360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )