myRT

myRT report for GCA_900475875.1_47297_B01

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Seq: LS483425.1 Streptococcus pyogenes strain NCTC13737 genome assembly, chromosome: 1 (1819726 bp)
Overview 1 RT 1: 721630-727072 bp 2 RT 2: 739381-753039 bp Neighborhood of RT #1 [721630, 727113] DUF3801 VirD4 RVT-GII TraG-D_C SSB_OBF Neighborhood of RT #2 [739381, 753077] PHA03411 COG4646 COG4646 KOG1000 ssb RVT-GII Intron_maturas2 Relaxase MobC Feature: gene Location: 721630-722115 bp Ori: SQH22494.1 Feature: domain Description: DUF3801 Location: 721699-722095 bp Feature: domain Description: DUF3801 Location: 721 699-722095 bp Feature: gene Location: 722112-722888 bp Ori: SQH22496.1 Feature: domain Description: VirD4 Location: 722355-722868 bp Feature: domain Description: VirD4 Location: 722355-722868 bp Feature: gene Location: 723569-725476 bp Ori: SQH22497.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 723899-724643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 723899-724643 bp Feature: gene Location: 725701-726636 bp Ori: SQH22500.1 Feature: domain Description: TraG-D_C Location: 726091-726445 bp Feature: domain Description: TraG-D_C Location: 726091 -726445 bp Feature: gene Location: 726802-727113 bp Ori: SQH22502.1 Feature: domain Description: SSB_OBF Location: 726856-727072 bp Feature: domain Description: SSB_OBF Location: 726856-727072 bp Feature: gene Location: 739381-748137 bp Ori: SQH22530.1 Feature: domain Description: PHA03411 Location: 742978-743227 bp Feature: domain Description: PHA0341 1 Location: 742978-743227 bp Feature: domain Description: COG4646 Location: 743542-744298 bp Feature: domain Description: COG4646 Location: 743542-744298 bp Feature: domain Description: COG4646 Location: 744562-746275 bp Feature: domain Description: COG4646 Location: 744562-746275 bp Feature: domain Description: KOG1000 Location: 746626-746860 bp Feature: domain Description: KOG1 000 Location: 746626-746860 bp Feature: gene Location: 748180-748839 bp Ori: SQH22532.1 Feature: domain Description: ssb Location: 748426-748816 bp Feature: domain Description: ssb Location: 748426-74881 6 bp Feature: gene Location: 750008-751885 bp Ori: SQH22534.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750332-751154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750332-751 1 54 bp Feature: domain Description: Intron_maturas2 Location: 751253-751535 bp Feature: domain Description: Intron_maturas2 Location: 751 253-751 535 bp Feature: gene Location: 752350-752721 bp Ori: SQH22536.1 Feature: domain Description: Relaxase Location: 752380-752701 bp Feature: domain Description: Relaxase Location: 752380-752701 bp Feature: gene Location: 752727-753077 bp Ori: SQH22539.1 Feature: domain Description: MobC Location: 752925-753039 bp Feature: domain Description: MobC Location: 752925-753039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII, TraG-D_C (pfam12696), SSB_OBF (cd04496), PHA03411 (putative methyltransferase; Provisional), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), ssb (TIGR00621), Intron_maturas2 (pfam01348)
Relaxase (pfam03432), MobC (pfam05713)