myRT

myRT report for GCA_900478125.1_28193_B02

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Seq: LS483469.1 Serratia plymuthica strain NCTC12961 genome assembly, chromosome: 1 (5348135 bp)
Overview 1 RT 1: 81293-86930 bp 2 RT 2: 1421533-1427272 bp Neighborhood of RT #1 [81293, 87199] RVT-Retrons TIR_2 HipA_C HTH_31 Neighborhood of RT #2 [1421533, 1427272] PRK15260 RVT-UG4 RVT-UG4 PRK15260 RVT-UG4 Feature: gene Location: 81293-81931 bp Feature: gene Location: 82733-82888 bp Feature: gene Location: 83497-85149 bp Ori: SQI29166.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83821-84418 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83821 -8441 8 bp Feature: domain Description: TIR_2 Location: 84748-85081 bp Feature: domain Description: TIR_2 Location: 84748-85081 bp Feature: gene Location: 85434-86702 bp Ori: SQI29168.1 Feature: domain Description: HipA_C Location: 85986-86619 bp Feature: domain Description: HipA_C Location: 85986-8661 9 bp Feature: gene Location: 86705-87199 bp Ori: SQI29171.1 Feature: domain Description: HTH_31 Location: 86759-86930 bp Feature: domain Description: HTH_31 Location: 86759-86930 bp Feature: gene Location: 1421533-1421763 bp Feature: gene Location: 1421744-1422016 bp Ori: SQI34328.1 Gene: papK Feature: domain Description: PRK15260 Location: 1421747-1422011 bp Feature: domain Description: PRK1 5260 Location: 1 421 747-1 42201 1 bp Feature: gene Location: 1422082-1422600 bp Ori: SQI34331.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1422352-1422535 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 422352-1 422535 bp Feature: gene Location: 1422623-1422781 bp Ori: SQI34334.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1422626-1422779 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 422626-1 422779 bp Feature: gene Location: 1423028-1423798 bp Feature: gene Location: 1423856-1424131 bp Ori: SQI34339.1 Feature: domain Description: PRK15260 Location: 1423880-1424126 bp Feature: domain Description: PRK1 5260 Location: 1 423880-1 4241 26 bp Feature: gene Location: 1424560-1425099 bp Ori: SQI34342.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1424563-1424908 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 424563-1 424908 bp Feature: gene Location: 1425153-1425980 bp Feature: gene Location: 1426700-1427272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676), HipA_C (pfam07804), HTH_31 (pfam13560), PRK15260 (fimbrial protein SteF; Provisional), RVT-UG4