myRT

myRT report for GCA_900478755.1_32473_C02

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Seq: LS483498.1 Morganella morganii strain NCTC12028 genome assembly, chromosome: 1 (3906921 bp)
Overview 1 RT 1: 417645-425475 bp 2 RT 2: 2231295-2235808 bp Neighborhood of RT #1 [417645, 425540] DUF4942 PRK09692 RVT-UG5 nitrilase DUF4268 Neighborhood of RT #2 [2231295, 2235808] TIGR02646 COG3950 RVT-Retrons Feature: gene Location: 417645-418481 bp Ori: SQL15147.1 Feature: domain Description: DUF4942 Location: 417897-418458 bp Feature: domain Description: DUF4942 Location: 41 7897-41 8458 bp Feature: gene Location: 418873-420147 bp Ori: SQL15150.1 Gene: intA_2 Feature: domain Description: PRK09692 Location: 418882-420082 bp Feature: domain Description: PRK09692 Location: 41 8882-420082 bp Feature: gene Location: 420206-423112 bp Ori: SQL15153.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 420680-421190 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 420680-421 1 90 bp Feature: domain Description: nitrilase Location: 422594-423032 bp Feature: domain Description: nitrilase Location: 422594-423032 bp Feature: gene Location: 423109-423798 bp Feature: gene Location: 424377-425540 bp Ori: SQL15160.1 Feature: domain Description: DUF4268 Location: 425073-425475 bp Feature: domain Description: DUF4268 Location: 425073-425475 bp Feature: gene Location: 2231295-2231966 bp Ori: SQL25264.1 Feature: domain Description: TIGR02646 Location: 2231364-2231784 bp Feature: domain Description: TIGR02646 Location: 2231 364-2231 784 bp Feature: gene Location: 2231972-2233612 bp Ori: SQL25267.1 Feature: domain Description: COG3950 Location: 2232170-2233469 bp Feature: domain Description: COG3950 Location: 22321 70-2233469 bp Feature: gene Location: 2233605-2234537 bp Ori: SQL25272.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2233707-2234298 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2233707-2234298 bp Feature: gene Location: 2235261-2235515 bp Feature: gene Location: 2235536-2235808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4942 (pfam13708), PRK09692 (Integrase; provisional), RVT-UG5, nitrilase (cl11424), DUF4268 (pfam14088), TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons