myRT

myRT report for GCA_900520325.1_ASM90052032v1

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Seq: LS992169.1 Escherichia coli isolate Escherichia coli str. TO60 genome assembly, plasmid: 2 (172923 bp)
Overview 1 RT 1: 156-2054 bp 2 RT 2: 12392-16180 bp 3 RT 3: 158871-161552 bp Neighborhood of RT #1 [156, 2056] RVT-GII PHA02517 InsE Neighborhood of RT #2 [12392, 16218] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #3 [158871, 161554] PRK10173 PRK10173 RVT-GII PHA02517 InsE Feature: gene Location: 156-659 bp Ori: SYX23694.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-501 bp Feature: gene Location: 1251-1730 bp Ori: SYX23695.1 Feature: domain Description: PHA02517 Location: 1311-1665 bp Feature: domain Description: PHA0251 7 Location: 1 31 1 -1 665 bp Feature: gene Location: 1730-2056 bp Ori: SYX23696.1 Feature: domain Description: InsE Location: 1733-2054 bp Feature: domain Description: InsE Location: 1 733-2054 bp Feature: gene Location: 12392-12718 bp Ori: SYX23709.1 Feature: domain Description: InsE Location: 12395-12716 bp Feature: domain Description: InsE Location: 1 2395-1 271 6 bp Feature: gene Location: 12718-13197 bp Ori: SYX23710.1 Feature: domain Description: PHA02517 Location: 12778-13132 bp Feature: domain Description: PHA0251 7 Location: 1 2778-1 31 32 bp Feature: gene Location: 13789-15312 bp Ori: SYX23711.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14062-14794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4062-1 4794 bp Feature: domain Description: GIIM Note: maturase Location: 14869-15067 bp Feature: domain Description: GIIM Note: maturase Location: 1 4869-1 5067 bp Feature: gene Location: 15429-15785 bp Ori: SYX23712.1 Feature: domain Description: PHA02517 Location: 15432-15741 bp Feature: domain Description: PHA0251 7 Location: 1 5432-1 5741 bp Feature: gene Location: 15814-16218 bp Ori: SYX23713.1 Feature: domain Description: InsE Location: 15844-16180 bp Feature: domain Description: InsE Location: 1 5844-1 61 80 bp Feature: gene Location: 158871-159320 bp Ori: SYX23874.1 Gene: agp_2 Feature: domain Description: PRK10173 Location: 158874-159312 bp Feature: domain Description: PRK1 01 73 Location: 1 58874-1 5931 2 bp Feature: gene Location: 159295-159615 bp Ori: SYX23875.1 Gene: agp_3 Feature: domain Description: PRK10173 Location: 159298-159526 bp Feature: domain Description: PRK1 01 73 Location: 1 59298-1 59526 bp Feature: gene Location: 159654-160157 bp Ori: SYX23876.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159927-159999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 59927-1 59999 bp Feature: gene Location: 160749-161228 bp Ori: SYX23877.1 Feature: domain Description: PHA02517 Location: 160809-161163 bp Feature: domain Description: PHA0251 7 Location: 1 60809-1 61 1 63 bp Feature: gene Location: 161228-161554 bp Ori: SYX23878.1 Feature: domain Description: InsE Location: 161231-161552 bp Feature: domain Description: InsE Location: 1 61 231 -1 61 552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: LS992168.1 Escherichia coli isolate Escherichia coli str. TO60 genome assembly, chromosome: 1 (5031440 bp)
Overview 1 RT 1: 2783316-2789650 bp Neighborhood of RT #1 [2783316, 2789658] RVT-Retrons PRK11388 Feature: gene Location: 2783316-2784443 bp Feature: gene Location: 2784501-2784668 bp Feature: gene Location: 2784690-2786447 bp Ori: SYX16046.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2784834-2785452 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 784834-2 785452 bp Feature: gene Location: 2787018-2787257 bp Feature: gene Location: 2787739-2789658 bp Ori: SYX16050.1 Gene: acoR Feature: domain Description: PRK11388 Location: 2787742-2789650 bp Feature: domain Description: PRK11388 Location: 2 787742 -2 789650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional)