myRT

myRT report for GCA_900520335.1_ASM90052033v1

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Seq: LS992175.1 Citrobacter freundii isolate Citrobacter freundii str. E2614 genome assembly, chromosome: 1 (5172644 bp)
Overview 1 RT 1: 66788-72851 bp 2 RT 2: 3222757-3226784 bp Neighborhood of RT #1 [66788, 72853] PRK09678 Psu RVT-UG15 PRK09692 PRK11462 Neighborhood of RT #2 [3222757, 3226784] MobA_MobL RVT-Retrons HTH_XRE Feature: gene Location: 66788-67033 bp Ori: SYX42977.1 Feature: domain Description: PRK09678 Location: 66791-66974 bp Feature: domain Description: PRK09678 Location: 66791 -66974 bp Feature: gene Location: 67050-67616 bp Ori: SYX42978.1 Feature: domain Description: Psu Location: 67068-67611 bp Feature: domain Description: Psu Location: 67068-6761 1 bp Feature: gene Location: 68120-69742 bp Ori: SYX42979.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 68531-68954 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 68531 -68954 bp Feature: gene Location: 69758-70924 bp Ori: SYX42980.1 Gene: intS_1 Feature: domain Description: PRK09692 Location: 69764-70910 bp Feature: domain Description: PRK09692 Location: 69764-7091 0 bp Feature: gene Location: 71471-72853 bp Ori: SYX42981.1 Gene: yicJ_1 Feature: domain Description: PRK11462 Location: 71474-72851 bp Feature: domain Description: PRK1 1 462 Location: 71 474-72851 bp Feature: gene Location: 3222757-3224157 bp Ori: SYX46000.1 Gene: mobA_1 Feature: domain Description: MobA_MobL Location: 3222808-3223345 bp Feature: domain Description: MobA_MobL Location: 3222808-3223345 bp Feature: gene Location: 3224235-3224894 bp Feature: gene Location: 3225104-3226204 bp Ori: SYX46002.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3225245-3225800 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3225245-3225800 bp Feature: gene Location: 3226197-3226478 bp Ori: SYX46003.1 Gene: sinR_2 Feature: domain Description: HTH_XRE Location: 3226212-3226377 bp Feature: domain Description: HTH_XRE Location: 322621 2-3226377 bp Feature: gene Location: 3226569-3226784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), Psu (pfam07455), RVT-UG15, PRK09692 (Integrase; provisional), PRK11462 (putative transporter; Provisional), MobA_MobL (pfam03389), RVT-Retrons, HTH_XRE (smart00530)