myRT

myRT report for GCA_900622605.1_AJ218

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Seq: LR130541.1 Klebsiella pneumoniae strain AJ218 genome assembly, chromosome: 1 (5465992 bp)
Overview 1 RT 1: 1823960-1830431 bp 2 RT 2: 1933953-1942073 bp 3 RT 3: 3067969-3073157 bp 4 RT 4: 3105541-3108980 bp Neighborhood of RT #1 [1823960, 1830445] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [1933953, 1942279] SGNH_hydrolase_peri1 Lipase_GDSL_2 RVT-GII PRK10276 Neighborhood of RT #3 [3067969, 3073165] umuC PRK10276 RVT-GII PinE Neighborhood of RT #4 [3105541, 3108980] DUF1367 PRK10597 RVT-GII Feature: gene Location: 1823960-1825384 bp Feature: domain Description: SbcB Location: 1823966-1825382 bp Feature: domain Description: SbcB Location: 1 823966-1 825382 bp Feature: gene Location: 1825559-1826728 bp Feature: domain Description: dacD Location: 1825568-1826723 bp Feature: domain Description: dacD Location: 1 825568-1 826723 bp Feature: gene Location: 1827246-1828733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1827651-1828341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 827651 -1 828341 bp Feature: gene Location: 1828815-1829288 bp Feature: domain Description: PRK10016 Location: 1828818-1829277 bp Feature: domain Description: PRK1 001 6 Location: 1 82881 8-1 829277 bp Feature: gene Location: 1829372-1830445 bp Feature: domain Description: YccC Location: 1829393-1830431 bp Feature: domain Description: YccC Location: 1 829393-1 830431 bp Feature: gene Location: 1933953-1936769 bp Feature: domain Description: SGNH_hydrolase_peri1 Location: 1936248-1936722 bp Feature: domain Description: SGNH_hydrolase_peri1 Location: 1 936248-1 936722 bp Feature: gene Location: 1936930-1939131 bp Feature: domain Description: Lipase_GDSL_2 Location: 1938505-1939063 bp Feature: domain Description: Lipase_GDSL_2 Location: 1 938505-1 939063 bp Feature: gene Location: 1940147-1941634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1940552-1941242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 940552-1 941 242 bp Feature: gene Location: 1941712-1941846 bp Feature: gene Location: 1941908-1942279 bp Feature: domain Description: PRK10276 Location: 1941953-1942073 bp Feature: domain Description: PRK1 0276 Location: 1 941 953-1 942073 bp Feature: gene Location: 3067969-3069234 bp Feature: domain Description: umuC Location: 3067972-3069232 bp Feature: domain Description: umuC Location: 3067972-3069232 bp Feature: gene Location: 3069236-3069655 bp Feature: domain Description: PRK10276 Location: 3069239-3069650 bp Feature: domain Description: PRK1 0276 Location: 3069239-3069650 bp Feature: gene Location: 3069735-3071219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3070137-3070827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30701 37-3070827 bp Feature: gene Location: 3071228-3071395 bp Feature: gene Location: 3072617-3073165 bp Feature: domain Description: PinE Location: 3072620-3073157 bp Feature: domain Description: PinE Location: 3072620-30731 57 bp Feature: gene Location: 3105541-3106137 bp Feature: domain Description: DUF1367 Location: 3105544-3106129 bp Feature: domain Description: DUF1 367 Location: 31 05544-31 061 29 bp Feature: gene Location: 3106551-3106784 bp Feature: domain Description: PRK10597 Location: 3106554-3106779 bp Feature: domain Description: PRK1 0597 Location: 31 06554-31 06779 bp Feature: gene Location: 3106863-3108347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3107265-3107955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 07265-31 07955 bp Feature: gene Location: 3108356-3108523 bp Feature: gene Location: 3108843-3108980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), SGNH_hydrolase_peri1 (cd01825), Lipase_GDSL_2 (pfam13472), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PinE (COG1961)
DUF1367 (pfam07105), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: LR130542.1 Klebsiella pneumoniae strain AJ218 genome assembly, plasmid: 2 (202379 bp)
Overview 1 RT 1: 192006-195254 bp Neighborhood of RT #1 [192006, 195268] RVT-GII PRK10276 Feature: gene Location: 192006-192227 bp Feature: gene Location: 192489-192719 bp Feature: gene Location: 192953-194440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193358-194048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193358-194048 bp Feature: gene Location: 194446-194613 bp Feature: gene Location: 194843-195268 bp Feature: domain Description: PRK10276 Location: 194846-195254 bp Feature: domain Description: PRK102 76 Location: 194846-1952 54 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)