myRT

myRT report for GCA_900622635.1_B36

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Seq: LR130545.1 Escherichia coli strain B36 genome assembly, chromosome: 1 (5147585 bp)
Overview 1 RT 1: 87280-91244 bp 2 RT 2: 2060555-2064496 bp Neighborhood of RT #1 [87280, 91264] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [2060555, 2064496] RVT-Retrons Feature: gene Location: 87280-87606 bp Feature: domain Description: InsE Location: 87283-87604 bp Feature: domain Description: InsE Location: 87283-87604 bp Feature: gene Location: 87606-88085 bp Feature: domain Description: PHA02517 Location: 87666-88020 bp Feature: domain Description: PHA0251 7 Location: 87666-88020 bp Feature: gene Location: 88677-90200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88950-89682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88950-89682 bp Feature: domain Description: GIIM Note: maturase Location: 89757-89955 bp Feature: domain Description: GIIM Note: maturase Location: 89757-89955 bp Feature: gene Location: 90317-90757 bp Feature: domain Description: PHA02517 Location: 90320-90755 bp Feature: domain Description: PHA0251 7 Location: 90320-90755 bp Feature: gene Location: 90839-91264 bp Feature: domain Description: InsE Location: 90854-91244 bp Feature: domain Description: InsE Location: 90854-91 244 bp Feature: gene Location: 2060555-2060794 bp Feature: gene Location: 2061101-2061277 bp Feature: gene Location: 2061350-2063122 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2061509-2062127 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2061 509-20621 27 bp Feature: gene Location: 2063144-2063311 bp Feature: gene Location: 2063357-2064496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), RVT-Retrons

Seq: LR130546.1 Escherichia coli strain B36 genome assembly, plasmid: 2 (112588 bp)
Overview 1 RT 1: 13300-16938 bp Neighborhood of RT #1 [13300, 16943] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 13300-13440 bp Feature: gene Location: 13774-13983 bp Feature: gene Location: 14118-16019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14385-15216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14385-152 16 bp Feature: domain Description: Intron_maturas2 Location: 15330-15588 bp Feature: domain Description: Intron_maturas2 Location: 15330-15588 bp Feature: domain Description: HNHc Note: nucleases Location: 15762-15924 bp Feature: domain Description: HNHc Note: nucleases Location: 15762 -1592 4 bp Feature: gene Location: 16214-16654 bp Feature: domain Description: PRK13732 Location: 16220-16652 bp Feature: domain Description: PRK13732 Location: 162 2 0-16652 bp Feature: gene Location: 16710-16943 bp Feature: domain Description: DUF905 Location: 16740-16938 bp Feature: domain Description: DUF905 Location: 16740-16938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)