myRT

myRT report for GCA_900622695.1_MS14384

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Seq: LR130562.1 Escherichia coli strain MS14384 genome assembly, chromosome: 1 (5071813 bp)
Overview 1 RT 1: 1985345-1987842 bp 2 RT 2: 3891320-3897351 bp Neighborhood of RT #1 [1985345, 1987842] Asparaginase_2 RVT-GII Neighborhood of RT #2 [3891320, 3897351] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 1985345-1986376 bp Feature: domain Description: Asparaginase_2 Location: 1985435-1986368 bp Feature: domain Description: Asparaginase_2 Location: 1 985435-1 986368 bp Feature: gene Location: 1986703-1986852 bp Feature: gene Location: 1986900-1987346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1987206-1987308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 987206-1 987308 bp Feature: gene Location: 1987377-1987574 bp Feature: gene Location: 1987678-1987842 bp Feature: gene Location: 3891320-3892240 bp Feature: domain Description: AbiEii Location: 3891362-3892103 bp Feature: domain Description: AbiEii Location: 3891 362-38921 03 bp Feature: gene Location: 3892227-3893030 bp Feature: domain Description: AbiEi_3_N Location: 3892260-3892521 bp Feature: domain Description: AbiEi_3_N Location: 3892260-3892521 bp Feature: domain Description: AbiEi_3 Location: 3892533-3892989 bp Feature: domain Description: AbiEi_3 Location: 3892533-3892989 bp Feature: gene Location: 3893325-3896534 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3893853-3894342 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3893853-3894342 bp Feature: domain Description: nitrilase Location: 3895848-3896445 bp Feature: domain Description: nitrilase Location: 3895848-3896445 bp Feature: gene Location: 3896695-3896835 bp Feature: domain Description: Phage_ASH Location: 3896722-3896815 bp Feature: domain Description: Phage_ASH Location: 3896722-389681 5 bp Feature: gene Location: 3896881-3897351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: LR130563.1 Escherichia coli strain MS14384 genome assembly, plasmid: 2 (114230 bp)
Overview 1 RT 1: 12900-16137 bp 2 RT 2: 29498-32173 bp Neighborhood of RT #1 [12900, 16202] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [29498, 32181] InsE PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 12900-13304 bp Feature: domain Description: InsE Location: 12930-13266 bp Feature: domain Description: InsE Location: 12 930-132 66 bp Feature: gene Location: 13333-13689 bp Feature: domain Description: PHA02517 Location: 13336-13645 bp Feature: domain Description: PHA02 517 Location: 13336-13645 bp Feature: gene Location: 13806-15329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14079-14811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14079-14811 bp Feature: domain Description: GIIM Note: maturase Location: 14886-15084 bp Feature: domain Description: GIIM Note: maturase Location: 14886-15084 bp Feature: gene Location: 15283-15708 bp Feature: gene Location: 15921-16202 bp Feature: domain Description: PHA02517 Location: 15927-16137 bp Feature: domain Description: PHA02 517 Location: 1592 7-16137 bp Feature: gene Location: 29498-29824 bp Feature: domain Description: InsE Location: 29501-29822 bp Feature: domain Description: InsE Location: 2 9501-2 982 2 bp Feature: gene Location: 29824-30303 bp Feature: domain Description: PHA02517 Location: 29884-30238 bp Feature: domain Description: PHA02 517 Location: 2 9884-302 38 bp Feature: gene Location: 30895-31398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31168-31237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31168-312 37 bp Feature: gene Location: 31437-31748 bp Feature: domain Description: PRK10173 Location: 31440-31659 bp Feature: domain Description: PRK10173 Location: 31440-31659 bp Feature: gene Location: 31732-32181 bp Feature: domain Description: PRK10173 Location: 31735-32173 bp Feature: domain Description: PRK10173 Location: 31735-32 173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)