myRT

myRT report for GCA_900635115.1_34410_A02

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Seq: LR133933.1 Legionella pneumophila strain NCTC12180 genome assembly, chromosome: 1 (3369585 bp)
Overview 1 RT 1: 1145567-1151375 bp 2 RT 2: 2235153-2241878 bp Neighborhood of RT #1 [1145567, 1151428] PRK05318 RVT_N RVT-GII GIIM DUF1016_N YhcG_C Neighborhood of RT #2 [2235153, 2241878] NTP-PPase_MazG_Cterm Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT_N RVT-GII GIIM Tra_M Feature: gene Location: 1145567-1145719 bp Feature: gene Location: 1145758-1147113 bp Ori: VDY54988.1 Gene: dgt_1 Feature: domain Description: PRK05318 Location: 1145767-1147078 bp Feature: domain Description: PRK0531 8 Location: 1 1 45767-1 1 47078 bp Feature: gene Location: 1147349-1148845 bp Ori: VDY54990.1 Gene: ltrA_1 Feature: domain Description: RVT_N Location: 1147403-1147646 bp Feature: domain Description: RVT_N Location: 1 1 47403-1 1 47646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1147691-1148348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 47691 -1 1 48348 bp Feature: domain Description: GIIM Note: maturase Location: 1148414-1148648 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 4841 4-1 1 48648 bp Feature: gene Location: 1149628-1150311 bp Feature: gene Location: 1150397-1151428 bp Ori: VDY54995.1 Feature: domain Description: DUF1016_N Location: 1150436-1150835 bp Feature: domain Description: DUF1 01 6_N Location: 1 1 50436-1 1 50835 bp Feature: domain Description: YhcG_C Location: 1150916-1151375 bp Feature: domain Description: YhcG_C Location: 1 1 5091 6-1 1 51 375 bp Feature: gene Location: 2235153-2235530 bp Ori: VDY56851.1 Gene: mazG Feature: domain Description: NTP-PPase_MazG_Cterm Location: 2235180-2235516 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 22351 80-223551 6 bp Feature: gene Location: 2235836-2237287 bp Ori: VDY56852.1 Gene: tnpA_3 Feature: domain Description: Tnp_DNA_bind Location: 2235875-2236043 bp Feature: domain Description: Tnp_DNA_bind Location: 2235875-2236043 bp Feature: domain Description: DDE_Tnp_1 Location: 2236700-2236994 bp Feature: domain Description: DDE_Tnp_1 Location: 2236700-2236994 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2237000-2237279 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2237000-2237279 bp Feature: gene Location: 2237358-2238878 bp Ori: VDY56853.1 Gene: ltrA_2 Feature: domain Description: RVT_N Location: 2237415-2237658 bp Feature: domain Description: RVT_N Location: 223741 5-2237658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2237703-2238327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2237703-2238327 bp Feature: domain Description: GIIM Note: maturase Location: 2238378-2238612 bp Feature: domain Description: GIIM Note: maturase Location: 2238378-223861 2 bp Feature: gene Location: 2239771-2240100 bp Ori: VDY56854.1 Feature: domain Description: Tra_M Location: 2239774-2239969 bp Feature: domain Description: Tra_M Location: 2239774-2239969 bp Feature: gene Location: 2240298-2241878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF1016_N (pfam17761), YhcG_C, NTP-PPase_MazG_Cterm (cd11529), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281)
Tra_M (pfam05261)