myRT

myRT report for GCA_900635135.1_36603_E01

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Seq: LR133996.1 Shimwellia blattae strain NCTC10965 genome assembly, chromosome: 1 (4154215 bp)
Overview 1 RT 1: 3767741-3774873 bp Neighborhood of RT #1 [3767741, 3774878] HTH_Tnp_1 HTH_Tnp_1 RVT-GII Intron_maturas2 HNHc PRK09010 uvrA Feature: gene Location: 3767741-3768223 bp Ori: VDY66190.1 Feature: domain Description: HTH_Tnp_1 Location: 3767756-3767915 bp Feature: domain Description: HTH_Tnp_1 Location: 3767756-376791 5 bp Feature: domain Description: HTH_Tnp_1 Location: 3767921-3768128 bp Feature: domain Description: HTH_Tnp_1 Location: 3767921 -37681 28 bp Feature: gene Location: 3768269-3768406 bp Feature: gene Location: 3768690-3770420 bp Ori: VDY66192.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3768828-3769665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3768828-3769665 bp Feature: domain Description: Intron_maturas2 Location: 3769773-3770055 bp Feature: domain Description: Intron_maturas2 Location: 3769773-3770055 bp Feature: domain Description: HNHc Note: nucleases Location: 3770196-3770373 bp Feature: domain Description: HNHc Note: nucleases Location: 37701 96-3770373 bp Feature: gene Location: 3771185-3771724 bp Ori: VDY66193.1 Gene: ssb_2 Feature: domain Description: PRK09010 Location: 3771188-3771722 bp Feature: domain Description: PRK0901 0 Location: 3771 1 88-3771 722 bp Feature: gene Location: 3772050-3774878 bp Ori: VDY66194.1 Gene: uvrA Feature: domain Description: uvrA Location: 3772053-3774873 bp Feature: domain Description: uvrA Location: 3772053-3774873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK09010 (single-stranded DNA-binding protein; Provisional), uvrA (PRK00349)