myRT

myRT report for GCA_900635205.1_39081_F01

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Seq: LR134080.1 Escherichia coli strain NCTC9082 genome assembly, chromosome: 1 (5030213 bp)
Overview 1 RT 1: 876591-885550 bp 2 RT 2: 3011041-3018129 bp 3 RT 3: 4305671-4310787 bp Neighborhood of RT #1 [876591, 885561] Peptidase_S6 autotrans_barl PHA02517 RVT-GII GIIM PHA02517 HTH_38 Tra8 Neighborhood of RT #2 [3011041, 3018129] RhbC MFS_SLC46_TetA_like RVT-GII GIIM PHA02517 Neighborhood of RT #3 [4305671, 4310801] fecE RVT-GII GIIM PHA02517 InsE Feature: gene Location: 876591-880709 bp Ori: VDY92602.1 Gene: pic Feature: domain Description: Peptidase_S6 Location: 876744-878916 bp Feature: domain Description: Peptidase_S6 Location: 876744-87891 6 bp Feature: domain Description: autotrans_barl Location: 879480-880707 bp Feature: domain Description: autotrans_barl Location: 879480-880707 bp Feature: gene Location: 881171-881545 bp Ori: VDY92603.1 Feature: domain Description: PHA02517 Location: 881174-881534 bp Feature: domain Description: PHA0251 7 Location: 881 1 74-881 534 bp Feature: gene Location: 881740-883272 bp Ori: VDY92604.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882022-882754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882022-882754 bp Feature: domain Description: GIIM Note: maturase Location: 882829-883027 bp Feature: domain Description: GIIM Note: maturase Location: 882829-883027 bp Feature: gene Location: 883854-884093 bp Ori: VDY92605.1 Feature: domain Description: PHA02517 Location: 883857-884028 bp Feature: domain Description: PHA0251 7 Location: 883857-884028 bp Feature: gene Location: 884410-885561 bp Ori: VDY92606.1 Gene: tra8_2_2 Feature: domain Description: HTH_38 Location: 884419-884533 bp Feature: domain Description: HTH_38 Location: 88441 9-884533 bp Feature: domain Description: Tra8 Location: 884569-885550 bp Feature: domain Description: Tra8 Location: 884569-885550 bp Feature: gene Location: 3011041-3012765 bp Ori: VDY94635.1 Gene: iucA Feature: domain Description: RhbC Location: 3011071-3012754 bp Feature: domain Description: RhbC Location: 301 1 071 -301 2754 bp Feature: gene Location: 3012901-3014094 bp Ori: VDY94636.1 Gene: shiF Feature: domain Description: MFS_SLC46_TetA_like Location: 3012982-3014062 bp Feature: domain Description: MFS_SLC46_TetA_like Location: 301 2982-301 4062 bp Feature: gene Location: 3015661-3017184 bp Ori: VDY94637.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3015934-3016666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301 5934-301 6666 bp Feature: domain Description: GIIM Note: maturase Location: 3016741-3016939 bp Feature: domain Description: GIIM Note: maturase Location: 301 6741 -301 6939 bp Feature: gene Location: 3017376-3017747 bp Ori: VDY94638.1 Feature: domain Description: PHA02517 Location: 3017379-3017745 bp Feature: domain Description: PHA0251 7 Location: 301 7379-301 7745 bp Feature: gene Location: 3017629-3018129 bp Feature: gene Location: 4305671-4306438 bp Ori: VDY95789.1 Gene: fecE Feature: domain Description: fecE Location: 4305674-4306436 bp Feature: domain Description: fecE Location: 4305674-4306436 bp Feature: gene Location: 4306995-4307252 bp Feature: gene Location: 4307903-4309426 bp Ori: VDY95791.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4308176-4308908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43081 76-4308908 bp Feature: domain Description: GIIM Note: maturase Location: 4308983-4309181 bp Feature: domain Description: GIIM Note: maturase Location: 4308983-43091 81 bp Feature: gene Location: 4310018-4310257 bp Ori: VDY95792.1 Feature: domain Description: PHA02517 Location: 4310021-4310192 bp Feature: domain Description: PHA0251 7 Location: 431 0021 -431 01 92 bp Feature: gene Location: 4310499-4310801 bp Ori: VDY95793.1 Feature: domain Description: InsE Location: 4310538-4310787 bp Feature: domain Description: InsE Location: 431 0538-431 0787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_38 (pfam13936), Tra8 (COG2826), RhbC (COG4264), MFS_SLC46_TetA_like (cd17330), fecE (PRK11231)
InsE (COG2963)