myRT

myRT report for GCA_900635545.1_30316_G02

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Seq: LR134142.1 Salmonella enterica subsp. enterica serovar Sanjuan strain NCTC7406 genome assembly, chromosome: 1 (4673657 bp)
Overview 1 RT 1: 4164810-4171169 bp Neighborhood of RT #1 [4164810, 4171174] YjeJ DUF4156 RVT_N RVT-GII GIIM HNHc groEL groES Feature: gene Location: 4164810-4165667 bp Ori: VEA09542.1 Feature: domain Description: YjeJ Location: 4164813-4165656 bp Feature: domain Description: YjeJ Location: 41 6481 3-41 65656 bp Feature: gene Location: 4165715-4166068 bp Ori: VEA09543.1 Feature: domain Description: DUF4156 Location: 4165784-4166060 bp Feature: domain Description: DUF41 56 Location: 41 65784-41 66060 bp Feature: gene Location: 4166402-4168171 bp Ori: VEA09544.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4166537-4166771 bp Feature: domain Description: RVT_N Location: 41 66537-41 66771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4166825-4167470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 66825-41 67470 bp Feature: domain Description: GIIM Note: maturase Location: 4167524-4167755 bp Feature: domain Description: GIIM Note: maturase Location: 41 67524-41 67755 bp Feature: domain Description: HNHc Note: nucleases Location: 4167968-4168121 bp Feature: domain Description: HNHc Note: nucleases Location: 41 67968-41 681 21 bp Feature: gene Location: 4169191-4170837 bp Ori: VEA09545.1 Gene: groEL Feature: domain Description: groEL Location: 4169197-4170823 bp Feature: domain Description: groEL Location: 41 691 97-41 70823 bp Feature: gene Location: 4170881-4171174 bp Ori: VEA09546.1 Gene: groES Feature: domain Description: groES Location: 4170884-4171169 bp Feature: domain Description: groES Location: 41 70884-41 71 1 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjeJ (pfam15922), DUF4156 (pfam13698), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852), groES (PRK14533)