myRT

myRT report for GCA_900635685.1_32407_D01

Download annotations/find similar RTs

Seq: LR134157.1 Escherichia coli strain NCTC11105 genome assembly, chromosome: 1 (4692802 bp)
Overview 1 RT 1: 56595-61784 bp 2 RT 2: 1931104-1940121 bp Neighborhood of RT #1 [56595, 61831] PRK10945 RVT-GII RVT-GII GIIM PHA02517 PRK10681 Neighborhood of RT #2 [1931104, 1940171] DUF4011 DEXXQc_SF1 SF1_C_Upf1 MTES_1575 PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 56595-56807 bp Ori: VEA79922.1 Gene: hha_1 Feature: domain Description: PRK10945 Location: 56610-56802 bp Feature: domain Description: PRK1 0945 Location: 5661 0-56802 bp Feature: gene Location: 57039-57278 bp Feature: gene Location: 58701-59660 bp Ori: VEA79924.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58974-59586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58974-59586 bp Feature: gene Location: 59620-60225 bp Ori: VEA79925.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59635-59707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59635-59707 bp Feature: domain Description: GIIM Note: maturase Location: 59782-60001 bp Feature: domain Description: GIIM Note: maturase Location: 59782-60001 bp Feature: gene Location: 60342-60788 bp Ori: VEA79926.1 Feature: domain Description: PHA02517 Location: 60345-60786 bp Feature: domain Description: PHA0251 7 Location: 60345-60786 bp Feature: gene Location: 61181-61831 bp Ori: VEA79927.1 Gene: deoQ Feature: domain Description: PRK10681 Location: 61184-61784 bp Feature: domain Description: PRK1 0681 Location: 61 1 84-61 784 bp Feature: gene Location: 1931104-1936545 bp Ori: VEA81786.1 Feature: domain Description: DUF4011 Location: 1931401-1931734 bp Feature: domain Description: DUF401 1 Location: 1 931 401 -1 931 734 bp Feature: domain Description: DEXXQc_SF1 Location: 1932091-1935193 bp Feature: domain Description: DEXXQc_SF1 Location: 1 932091 -1 9351 93 bp Feature: domain Description: SF1_C_Upf1 Location: 1935202-1935730 bp Feature: domain Description: SF1 _C_Upf1 Location: 1 935202-1 935730 bp Feature: domain Description: MTES_1575 Location: 1935859-1936150 bp Feature: domain Description: MTES_1 575 Location: 1 935859-1 9361 50 bp Feature: gene Location: 1936766-1937140 bp Ori: VEA81787.1 Feature: domain Description: PHA02517 Location: 1936787-1937132 bp Feature: domain Description: PHA0251 7 Location: 1 936787-1 9371 32 bp Feature: gene Location: 1937305-1938828 bp Ori: VEA81788.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1937578-1938310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 937578-1 93831 0 bp Feature: domain Description: GIIM Note: maturase Location: 1938385-1938583 bp Feature: domain Description: GIIM Note: maturase Location: 1 938385-1 938583 bp Feature: gene Location: 1939420-1939845 bp Ori: VEA81789.1 Feature: domain Description: PHA02517 Location: 1939441-1939780 bp Feature: domain Description: PHA0251 7 Location: 1 939441 -1 939780 bp Feature: gene Location: 1939845-1940171 bp Ori: VEA81790.1 Feature: domain Description: InsE Location: 1939857-1940121 bp Feature: domain Description: InsE Location: 1 939857-1 9401 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10945 (hemolysin expression modulator Hha), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK10681 (DNA-binding transcriptional repressor DeoR; Provisional), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), SF1_C_Upf1 (cd18808), MTES_1575 (pfam18741), InsE (COG2963)