myRT

myRT report for GCA_900635835.1_34410_B02

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Seq: LR134178.1 Legionella sainthelensi strain NCTC12450 genome assembly, chromosome: 1 (4110070 bp)
Overview 1 RT 1: 2259935-2266111 bp 2 RT 2: 2456624-2462564 bp 3 RT 3: 3976426-3983377 bp Neighborhood of RT #1 [2259935, 2266111] SidC_N RVT-UG18 DDE_Tnp_1_3 Neighborhood of RT #2 [2456624, 2462572] MntR RVT-GII GIIM GAF_2 GAF_2 HisKA BaeS Neighborhood of RT #3 [3976426, 3983377] GGDEF EAL RVT-UNC CAP_ED CPBP Feature: gene Location: 2259935-2262340 bp Ori: VEB36325.1 Feature: domain Description: SidC_N Location: 2259944-2261336 bp Feature: domain Description: SidC_N Location: 2259944-2261 336 bp Feature: gene Location: 2262273-2262644 bp Feature: gene Location: 2262607-2263323 bp Ori: VEB36329.1 Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2262622-2263204 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 2262622-2263204 bp Feature: gene Location: 2263646-2264539 bp Ori: VEB36331.1 Feature: domain Description: DDE_Tnp_1_3 Location: 2263970-2264423 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 2263970-2264423 bp Feature: gene Location: 2264855-2266111 bp Feature: gene Location: 2456624-2457148 bp Ori: VEB36703.1 Feature: domain Description: MntR Location: 2456654-2456813 bp Feature: domain Description: MntR Location: 2456654-245681 3 bp Feature: gene Location: 2457136-2457828 bp Feature: gene Location: 2458190-2459428 bp Ori: VEB36707.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2458388-2459045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2458388-2459045 bp Feature: domain Description: GIIM Note: maturase Location: 2459126-2459336 bp Feature: domain Description: GIIM Note: maturase Location: 24591 26-2459336 bp Feature: gene Location: 2460592-2462139 bp Ori: VEB36708.1 Feature: domain Description: GAF_2 Location: 2460895-2461300 bp Feature: domain Description: GAF_2 Location: 2460895-2461 300 bp Feature: domain Description: GAF_2 Location: 2461411-2461819 bp Feature: domain Description: GAF_2 Location: 2461 41 1 -2461 81 9 bp Feature: domain Description: HisKA Location: 2461903-2462047 bp Feature: domain Description: HisKA Location: 2461 903-2462047 bp Feature: gene Location: 2462081-2462572 bp Ori: VEB36710.1 Gene: phoR Feature: domain Description: BaeS Location: 2462105-2462564 bp Feature: domain Description: BaeS Location: 24621 05-2462564 bp Feature: gene Location: 3976426-3978036 bp Ori: VEB39395.1 Gene: cph2_4 Feature: domain Description: GGDEF Location: 3976771-3977251 bp Feature: domain Description: GGDEF Location: 3976771 -3977251 bp Feature: domain Description: EAL Location: 3977326-3978022 bp Feature: domain Description: EAL Location: 3977326-3978022 bp Feature: gene Location: 3978098-3978508 bp Feature: gene Location: 3978826-3980211 bp Ori: VEB39400.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 3979063-3979699 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3979063-3979699 bp Feature: gene Location: 3980186-3981298 bp Ori: VEB39402.1 Feature: domain Description: CAP_ED Location: 3980225-3980525 bp Feature: domain Description: CAP_ED Location: 3980225-3980525 bp Feature: domain Description: CPBP Location: 3981002-3981251 bp Feature: domain Description: CPBP Location: 3981 002-3981 251 bp Feature: gene Location: 3981311-3983377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SidC_N (pfam18219), RVT-UG18, DDE_Tnp_1_3 (pfam13612), MntR (COG1321), RVT-GII, GIIM (pfam08388), GAF_2 (pfam13185), HisKA (smart00388), BaeS (COG0642), GGDEF (TIGR00254)
EAL (smart00052), RVT-DGRs/RVT-CRISPR/RVT-UG26/RVT-UG27(RVT-UNC), CAP_ED (cl00047), CPBP