myRT

myRT report for GCA_900636035.1_38656_G01

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Seq: LR134215.1 Shimwellia blattae strain NCTC12127 genome assembly, chromosome: 1 (4152791 bp)
Overview 1 RT 1: 3764977-3772109 bp Neighborhood of RT #1 [3764977, 3772114] HTH_Tnp_1 HTH_Tnp_1 RVT-GII Intron_maturas2 HNHc PRK09010 uvrA Feature: gene Location: 3764977-3765459 bp Ori: VEC27267.1 Feature: domain Description: HTH_Tnp_1 Location: 3764992-3765151 bp Feature: domain Description: HTH_Tnp_1 Location: 3764992-37651 51 bp Feature: domain Description: HTH_Tnp_1 Location: 3765157-3765364 bp Feature: domain Description: HTH_Tnp_1 Location: 37651 57-3765364 bp Feature: gene Location: 3765505-3765642 bp Feature: gene Location: 3765926-3767656 bp Ori: VEC27275.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3766064-3766901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3766064-3766901 bp Feature: domain Description: Intron_maturas2 Location: 3767009-3767291 bp Feature: domain Description: Intron_maturas2 Location: 3767009-3767291 bp Feature: domain Description: HNHc Note: nucleases Location: 3767432-3767609 bp Feature: domain Description: HNHc Note: nucleases Location: 3767432-3767609 bp Feature: gene Location: 3768421-3768960 bp Ori: VEC27279.1 Gene: ssb_2 Feature: domain Description: PRK09010 Location: 3768424-3768958 bp Feature: domain Description: PRK0901 0 Location: 3768424-3768958 bp Feature: gene Location: 3769286-3772114 bp Ori: VEC27283.1 Gene: uvrA Feature: domain Description: uvrA Location: 3769289-3772109 bp Feature: domain Description: uvrA Location: 3769289-37721 09 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK09010 (single-stranded DNA-binding protein; Provisional), uvrA (PRK00349)