myRT

myRT report for GCA_900636065.1_38670_D01

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Seq: LR134221.1 Escherichia coli strain NCTC11113 genome assembly, chromosome: 1 (4972355 bp)
Overview 1 RT 1: 3896616-3901403 bp Neighborhood of RT #1 [3896616, 3901561] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI DDE_Tnp_1_assoc Feature: gene Location: 3896616-3897119 bp Feature: gene Location: 3897239-3898375 bp Ori: VEC74401.1 Feature: domain Description: YhhI Location: 3897242-3897605 bp Feature: domain Description: YhhI Location: 3897242-3897605 bp Feature: domain Description: YhhI Location: 3897662-3898016 bp Feature: domain Description: YhhI Location: 3897662-389801 6 bp Feature: domain Description: YhhI Location: 3898034-3898277 bp Feature: domain Description: YhhI Location: 3898034-3898277 bp Feature: gene Location: 3898822-3900072 bp Ori: VEC74402.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3899026-3899683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3899026-3899683 bp Feature: domain Description: GIIM Note: maturase Location: 3899764-3899986 bp Feature: domain Description: GIIM Note: maturase Location: 3899764-3899986 bp Feature: gene Location: 3900604-3901200 bp Ori: VEC74403.1 Gene: ydcC_2 Feature: domain Description: YhhI Location: 3900649-3901003 bp Feature: domain Description: YhhI Location: 3900649-3901 003 bp Feature: domain Description: YhhI Location: 3901003-3901183 bp Feature: domain Description: YhhI Location: 3901 003-3901 1 83 bp Feature: gene Location: 3901139-3901561 bp Ori: VEC74404.1 Feature: domain Description: DDE_Tnp_1_assoc Location: 3901142-3901403 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 3901 1 42-3901 403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808)