myRT

myRT report for GCA_900636075.1_38670_C01

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Seq: LR134222.1 Escherichia coli strain NCTC11129 genome assembly, chromosome: 1 (5008027 bp)
Overview 1 RT 1: 4404892-4410637 bp 2 RT 2: 4656811-4661715 bp Neighborhood of RT #1 [4404892, 4410864] SLATT_5 RVT-UG17 phage_tail_N Peptidase_S74 Neighborhood of RT #2 [4656811, 4661726] SF2_C_SNF PHA02517 RVT-GII GIIM PHA02517 HTH_38 Tra8 Feature: gene Location: 4404892-4405059 bp Feature: gene Location: 4405186-4405737 bp Ori: VEC45646.1 Feature: domain Description: SLATT_5 Location: 4405192-4405708 bp Feature: domain Description: SLATT_5 Location: 44051 92-4405708 bp Feature: gene Location: 4405715-4407085 bp Ori: VEC45647.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4405943-4406549 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 4405943-4406549 bp Feature: gene Location: 4407193-4407327 bp Feature: gene Location: 4407523-4410864 bp Ori: VEC45649.1 Feature: domain Description: phage_tail_N Location: 4407526-4407925 bp Feature: domain Description: phage_tail_N Location: 4407526-4407925 bp Feature: domain Description: Peptidase_S74 Location: 4410490-4410637 bp Feature: domain Description: Peptidase_S74 Location: 441 0490-441 0637 bp Feature: gene Location: 4656811-4657122 bp Ori: VEC45883.1 Feature: domain Description: SF2_C_SNF Location: 4656814-4656970 bp Feature: domain Description: SF2_C_SNF Location: 465681 4-4656970 bp Feature: gene Location: 4657347-4657739 bp Ori: VEC45884.1 Feature: domain Description: PHA02517 Location: 4657353-4657731 bp Feature: domain Description: PHA0251 7 Location: 4657353-4657731 bp Feature: gene Location: 4657904-4659427 bp Ori: VEC45885.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4658177-4658909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46581 77-4658909 bp Feature: domain Description: GIIM Note: maturase Location: 4658984-4659182 bp Feature: domain Description: GIIM Note: maturase Location: 4658984-46591 82 bp Feature: gene Location: 4660019-4660258 bp Ori: VEC45886.1 Feature: domain Description: PHA02517 Location: 4660022-4660193 bp Feature: domain Description: PHA0251 7 Location: 4660022-46601 93 bp Feature: gene Location: 4660575-4661726 bp Ori: VEC45887.1 Gene: tra8_2_3 Feature: domain Description: HTH_38 Location: 4660584-4660698 bp Feature: domain Description: HTH_38 Location: 4660584-4660698 bp Feature: domain Description: Tra8 Location: 4660734-4661715 bp Feature: domain Description: Tra8 Location: 4660734-4661 71 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, phage_tail_N (pfam08400), Peptidase_S74 (pfam13884), SF2_C_SNF (cd18793), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_38 (pfam13936), Tra8 (COG2826)