myRT

myRT report for GCA_900636275.1_40295_G01

Download annotations/find similar RTs

Seq: LR134246.1 Escherichia coli strain NCTC9702 genome assembly, chromosome: 1 (5297958 bp)
Overview 1 RT 1: 901665-907971 bp 2 RT 2: 4055240-4061349 bp 3 RT 3: 4122584-4128632 bp Neighborhood of RT #1 [901665, 907971] cztS_silS_copS DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM PHA02517 Neighborhood of RT #2 [4055240, 4061408] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Neighborhood of RT #3 [4122584, 4128632] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Feature: gene Location: 901665-902516 bp Ori: VED33817.1 Feature: domain Description: cztS_silS_copS Location: 901680-902334 bp Feature: domain Description: cztS_silS_copS Location: 901 680-902334 bp Feature: gene Location: 903548-903979 bp Ori: VED33819.1 Feature: domain Description: DDE_Tnp_IS66 Location: 903554-903824 bp Feature: domain Description: DDE_Tnp_IS66 Location: 903554-903824 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 903845-903956 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 903845-903956 bp Feature: gene Location: 905619-907142 bp Ori: VED33821.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 905892-906624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 905892-906624 bp Feature: domain Description: GIIM Note: maturase Location: 906699-906897 bp Feature: domain Description: GIIM Note: maturase Location: 906699-906897 bp Feature: gene Location: 907259-907705 bp Ori: VED33823.1 Feature: domain Description: PHA02517 Location: 907262-907703 bp Feature: domain Description: PHA0251 7 Location: 907262-907703 bp Feature: gene Location: 907708-907971 bp Feature: gene Location: 4055240-4056160 bp Ori: VED37281.1 Feature: domain Description: AbiEii Location: 4055282-4056023 bp Feature: domain Description: AbiEii Location: 4055282-4056023 bp Feature: gene Location: 4056147-4056929 bp Ori: VED37282.1 Feature: domain Description: AbiEi_3_N Location: 4056159-4056420 bp Feature: domain Description: AbiEi_3_N Location: 40561 59-4056420 bp Feature: domain Description: AbiEi_3 Location: 4056432-4056888 bp Feature: domain Description: AbiEi_3 Location: 4056432-4056888 bp Feature: gene Location: 4057245-4060454 bp Ori: VED37283.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4057773-4058262 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4057773-4058262 bp Feature: domain Description: nitrilase Location: 4059768-4060365 bp Feature: domain Description: nitrilase Location: 4059768-4060365 bp Feature: gene Location: 4060801-4061271 bp Feature: gene Location: 4061268-4061408 bp Ori: VED37285.1 Feature: domain Description: SfsB Location: 4061277-4061349 bp Feature: domain Description: SfsB Location: 4061 277-4061 349 bp Feature: gene Location: 4122584-4123087 bp Feature: gene Location: 4123207-4124343 bp Ori: VED37358.1 Feature: domain Description: YhhI Location: 4123210-4123573 bp Feature: domain Description: YhhI Location: 41 2321 0-41 23573 bp Feature: domain Description: YhhI Location: 4123630-4123984 bp Feature: domain Description: YhhI Location: 41 23630-41 23984 bp Feature: domain Description: YhhI Location: 4124005-4124245 bp Feature: domain Description: YhhI Location: 41 24005-41 24245 bp Feature: gene Location: 4124790-4126040 bp Ori: VED37359.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4124994-4125651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 24994-41 25651 bp Feature: domain Description: GIIM Note: maturase Location: 4125732-4125954 bp Feature: domain Description: GIIM Note: maturase Location: 41 25732-41 25954 bp Feature: gene Location: 4126572-4127528 bp Ori: VED37360.1 Feature: domain Description: YhhI Location: 4126575-4126920 bp Feature: domain Description: YhhI Location: 41 26575-41 26920 bp Feature: domain Description: YhhI Location: 4126977-4127331 bp Feature: domain Description: YhhI Location: 41 26977-41 27331 bp Feature: domain Description: YhhI Location: 4127331-4127511 bp Feature: domain Description: YhhI Location: 41 27331 -41 2751 1 bp Feature: gene Location: 4127841-4128632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cztS_silS_copS (TIGR01386), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5
nitrilase (cl11424), SfsB (COG3423), YhhI (COG5433)