myRT

myRT report for GCA_900636315.1_40363_G01

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Seq: LR134254.1 Klebsiella aerogenes strain NCTC9644 genome assembly, chromosome: 1 (5457304 bp)
Overview 1 RT 1: 1491195-1498636 bp 2 RT 2: 3440661-3448375 bp 3 RT 3: 4819655-4825126 bp Neighborhood of RT #1 [1491195, 1498833] ThiS SGNH_hydrolase_peri1 RVT-GII PRK10276 Neighborhood of RT #2 [3440661, 3448572] ThiS SGNH_hydrolase_peri1 RVT-GII PRK10276 Neighborhood of RT #3 [4819655, 4825167] traC_PFL_4706 RVT-UG2 HTH_XRE SfsB Feature: gene Location: 1491195-1493672 bp Ori: VED54178.1 Feature: domain Description: ThiS Location: 1491249-1491393 bp Feature: domain Description: ThiS Location: 1 491 249-1 491 393 bp Feature: gene Location: 1493759-1496293 bp Ori: VED54180.1 Feature: domain Description: SGNH_hydrolase_peri1 Location: 1495808-1496240 bp Feature: domain Description: SGNH_hydrolase_peri1 Location: 1 495808-1 496240 bp Feature: gene Location: 1496711-1498078 bp Ori: VED54182.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1497116-1497806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4971 1 6-1 497806 bp Feature: gene Location: 1498277-1498516 bp Feature: gene Location: 1498516-1498833 bp Ori: VED54185.1 Feature: domain Description: PRK10276 Location: 1498522-1498636 bp Feature: domain Description: PRK1 0276 Location: 1 498522-1 498636 bp Feature: gene Location: 3440661-3443138 bp Ori: VED56795.1 Feature: domain Description: ThiS Location: 3440715-3440859 bp Feature: domain Description: ThiS Location: 344071 5-3440859 bp Feature: gene Location: 3443225-3445759 bp Ori: VED56796.1 Feature: domain Description: SGNH_hydrolase_peri1 Location: 3444725-3445706 bp Feature: domain Description: SGNH_hydrolase_peri1 Location: 3444725-3445706 bp Feature: gene Location: 3446450-3447817 bp Ori: VED56797.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3446855-3447545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3446855-3447545 bp Feature: gene Location: 3448016-3448255 bp Feature: gene Location: 3448255-3448572 bp Ori: VED56799.1 Gene: umuD_2 Feature: domain Description: PRK10276 Location: 3448261-3448375 bp Feature: domain Description: PRK1 0276 Location: 3448261 -3448375 bp Feature: gene Location: 4819655-4822285 bp Ori: VED58019.1 Feature: domain Description: traC_PFL_4706 Location: 4819694-4822274 bp Feature: domain Description: traC_PFL_4706 Location: 481 9694-4822274 bp Feature: gene Location: 4822425-4822580 bp Feature: gene Location: 4822773-4824050 bp Ori: VED58021.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4822971-4823757 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4822971 -4823757 bp Feature: gene Location: 4824248-4824475 bp Ori: VED58022.1 Feature: domain Description: HTH_XRE Location: 4824290-4824452 bp Feature: domain Description: HTH_XRE Location: 4824290-4824452 bp Feature: gene Location: 4824892-4825167 bp Ori: VED58023.1 Feature: domain Description: SfsB Location: 4824901-4825126 bp Feature: domain Description: SfsB Location: 4824901 -48251 26 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ThiS (pfam02597), SGNH_hydrolase_peri1 (cd01825), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), traC_PFL_4706 (TIGR03744), RVT-UG2, HTH_XRE (smart00530), SfsB (COG3423)