myRT

myRT report for GCA_900636545.1_42727_C01

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Seq: LR134290.1 Pseudomonas mendocina strain NCTC10897 genome assembly, chromosome: 1 (5192837 bp)
Overview 1 RT 1: 3217941-3223038 bp 2 RT 2: 4122385-4127701 bp Neighborhood of RT #1 [3217941, 3223038] LysR PRK11752 RVT-Retrons Neighborhood of RT #2 [4122385, 4127745] SUL1 RVT-UG17 SLATT_5 NhoA Feature: gene Location: 3217941-3218915 bp Ori: VEE16340.1 Gene: dmlR_12 Feature: domain Description: LysR Location: 3218013-3218877 bp Feature: domain Description: LysR Location: 321 801 3-321 8877 bp Feature: gene Location: 3219083-3219922 bp Ori: VEE16341.1 Gene: yghU_2 Feature: domain Description: PRK11752 Location: 3219086-3219875 bp Feature: domain Description: PRK1 1 752 Location: 321 9086-321 9875 bp Feature: gene Location: 3220474-3221670 bp Ori: VEE16342.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3220630-3221218 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3220630-3221 21 8 bp Feature: gene Location: 3221685-3222410 bp Feature: gene Location: 3222496-3223038 bp Feature: gene Location: 4122385-4123896 bp Ori: VEE17175.1 Gene: ychM_3 Feature: domain Description: SUL1 Location: 4122397-4123861 bp Feature: domain Description: SUL1 Location: 41 22397-41 23861 bp Feature: gene Location: 4124017-4124163 bp Feature: gene Location: 4124187-4125545 bp Ori: VEE17177.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4124412-4124991 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 41 2441 2-41 24991 bp Feature: gene Location: 4125666-4126259 bp Ori: VEE17178.1 Feature: domain Description: SLATT_5 Location: 4125687-4126245 bp Feature: domain Description: SLATT_5 Location: 41 25687-41 26245 bp Feature: gene Location: 4126918-4127745 bp Ori: VEE17179.1 Gene: nat Feature: domain Description: NhoA Location: 4126936-4127701 bp Feature: domain Description: NhoA Location: 41 26936-41 27701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK11752 (putative S-transferase; Provisional), RVT-Retrons, SUL1 (COG0659), RVT-UG17, SLATT_5 (pfam18160), NhoA (COG2162)