myRT

myRT report for GCA_900636825.1_44858_E01

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Seq: LR134318.1 Pseudomonas fluorescens strain NCTC9428 genome assembly, chromosome: 1 (6033966 bp)
Overview 1 RT 1: 2762462-2771312 bp 2 RT 2: 2774230-2780604 bp 3 RT 3: 3480587-3487759 bp Neighborhood of RT #1 [2762462, 2771312] fliH UvrD UvrD UvrD RVT-UG17 SLATT_5 Neighborhood of RT #2 [2774230, 2780783] RVT-UG7 PHP_HisPPase ABC_ATPase Neighborhood of RT #3 [3480587, 3487764] AcrR RVT-UG5 nitrilase 2OG-FeII_Oxy_3 AraC_binding_2 HTH_18 Feature: gene Location: 2762462-2763859 bp Feature: gene Location: 2764122-2766740 bp Ori: VEF10879.1 Gene: yjcD Feature: domain Description: fliH Location: 2764314-2764437 bp Feature: domain Description: fliH Location: 276431 4-2764437 bp Feature: domain Description: UvrD Location: 2764620-2764908 bp Feature: domain Description: UvrD Location: 2764620-2764908 bp Feature: domain Description: UvrD Location: 2765826-2766192 bp Feature: domain Description: UvrD Location: 2765826-27661 92 bp Feature: domain Description: UvrD Location: 2766336-2766654 bp Feature: domain Description: UvrD Location: 2766336-2766654 bp Feature: gene Location: 2766816-2768180 bp Ori: VEF10880.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2767044-2767647 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 2767044-2767647 bp Feature: gene Location: 2768177-2768743 bp Ori: VEF10881.1 Feature: domain Description: SLATT_5 Location: 2768186-2768705 bp Feature: domain Description: SLATT_5 Location: 27681 86-2768705 bp Feature: gene Location: 2769156-2771312 bp Feature: gene Location: 2774230-2774868 bp Feature: gene Location: 2775073-2776110 bp Feature: gene Location: 2776500-2777558 bp Ori: VEF10887.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2776659-2777076 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2776659-2777076 bp Feature: gene Location: 2777528-2777767 bp Feature: gene Location: 2778129-2780783 bp Ori: VEF10889.1 Feature: domain Description: PHP_HisPPase Location: 2778252-2778591 bp Feature: domain Description: PHP_HisPPase Location: 2778252-2778591 bp Feature: domain Description: ABC_ATPase Location: 2778948-2780604 bp Feature: domain Description: ABC_ATPase Location: 2778948-2780604 bp Feature: gene Location: 3480587-3481201 bp Ori: VEF11492.1 Feature: domain Description: AcrR Location: 3480590-3481133 bp Feature: domain Description: AcrR Location: 3480590-3481 1 33 bp Feature: gene Location: 3481472-3481873 bp Feature: gene Location: 3482634-3485636 bp Ori: VEF11494.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3483102-3483600 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 34831 02-3483600 bp Feature: domain Description: nitrilase Location: 3484866-3485550 bp Feature: domain Description: nitrilase Location: 3484866-3485550 bp Feature: gene Location: 3485740-3486537 bp Ori: VEF11495.1 Feature: domain Description: 2OG-FeII_Oxy_3 Location: 3486124-3486415 bp Feature: domain Description: 2OG-FeII_Oxy_3 Location: 34861 24-348641 5 bp Feature: gene Location: 3486793-3487764 bp Ori: VEF11496.1 Feature: domain Description: AraC_binding_2 Location: 3486958-3487303 bp Feature: domain Description: AraC_binding_2 Location: 3486958-3487303 bp Feature: domain Description: HTH_18 Location: 3487519-3487759 bp Feature: domain Description: HTH_1 8 Location: 348751 9-3487759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fliH (PRK13386), UvrD (COG0210), RVT-UG17, SLATT_5 (pfam18160), RVT-UG7, PHP_HisPPase (cd07432), ABC_ATPase (pfam09818), AcrR (COG1309), RVT-UG5, nitrilase (cl11424)
2OG-FeII_Oxy_3 (pfam13640), AraC_binding_2 (pfam14525), HTH_18 (pfam12833)