myRT

myRT report for GCA_900636995.1_46338_G02

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Seq: LR134334.1 Pseudomonas chlororaphis strain NCTC7357 genome assembly, chromosome: 1 (7209930 bp)
Overview 1 RT 1: 1602536-1606367 bp 2 RT 2: 2513361-2519853 bp Neighborhood of RT #1 [1602536, 1606414] clpP tig RVT_N RVT-GII GIIM HNH Neighborhood of RT #2 [2513361, 2519853] AdoMet_MTases DEXHc_Snf RVT_N RVT-GII GIIM HNHc SF2_C_SNF Feature: gene Location: 1602536-1603177 bp Ori: VEF73104.1 Gene: clpP-2 Feature: domain Description: clpP Location: 1602593-1603160 bp Feature: domain Description: clpP Location: 1 602593-1 6031 60 bp Feature: gene Location: 1603271-1604539 bp Ori: VEF73105.1 Gene: tig Feature: domain Description: tig Location: 1603277-1604510 bp Feature: domain Description: tig Location: 1 603277-1 60451 0 bp Feature: gene Location: 1604711-1606414 bp Ori: VEF73106.1 Gene: ltrA_1 Feature: domain Description: RVT_N Location: 1604768-1605011 bp Feature: domain Description: RVT_N Location: 1 604768-1 60501 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1605056-1605692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 605056-1 605692 bp Feature: domain Description: GIIM Note: maturase Location: 1605743-1605977 bp Feature: domain Description: GIIM Note: maturase Location: 1 605743-1 605977 bp Feature: domain Description: HNH Note: nucleases Location: 1606229-1606367 bp Feature: domain Description: HNH Note: nucleases Location: 1 606229-1 606367 bp Feature: gene Location: 2513361-2514581 bp Ori: VEF73893.1 Feature: domain Description: AdoMet_MTases Location: 2513484-2513850 bp Feature: domain Description: AdoMet_MTases Location: 251 3484-251 3850 bp Feature: gene Location: 2514681-2515709 bp Ori: VEF73894.1 Feature: domain Description: DEXHc_Snf Location: 2514873-2515131 bp Feature: domain Description: DEXHc_Snf Location: 251 4873-251 51 31 bp Feature: gene Location: 2516308-2518026 bp Ori: VEF73895.1 Gene: ltrA_2 Feature: domain Description: RVT_N Location: 2516365-2516602 bp Feature: domain Description: RVT_N Location: 251 6365-251 6602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2516653-2517304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 6653-251 7304 bp Feature: domain Description: GIIM Note: maturase Location: 2517358-2517589 bp Feature: domain Description: GIIM Note: maturase Location: 251 7358-251 7589 bp Feature: domain Description: HNHc Note: nucleases Location: 2517823-2517979 bp Feature: domain Description: HNHc Note: nucleases Location: 251 7823-251 7979 bp Feature: gene Location: 2518193-2519353 bp Ori: VEF73896.1 Feature: domain Description: SF2_C_SNF Location: 2518796-2519189 bp Feature: domain Description: SF2_C_SNF Location: 251 8796-251 91 89 bp Feature: gene Location: 2519650-2519853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT clpP, tig (TIGR00115), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), AdoMet_MTases (cl17173), DEXHc_Snf (cd17919), HNHc (smart00507), SF2_C_SNF (cd18793)