myRT

myRT report for GCA_900637625.1_52295_C01

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Seq: LR134385.1 Gardnerella vaginalis strain NCTC10287 genome assembly, chromosome: 1 (1667383 bp)
Overview 1 RT 1: 1235885-1240589 bp Neighborhood of RT #1 [1235885, 1240648] ParE_toxin COG2865 RVT-UG15 COG1373 Nudix_Hydrolase_29 Feature: gene Location: 1235885-1236208 bp Ori: VEH17652.1 Feature: domain Description: ParE_toxin Location: 1235903-1236170 bp Feature: domain Description: ParE_toxin Location: 1 235903-1 2361 70 bp Feature: gene Location: 1236677-1238092 bp Ori: VEH17653.1 Feature: domain Description: COG2865 Location: 1236680-1238087 bp Feature: domain Description: COG2865 Location: 1 236680-1 238087 bp Feature: gene Location: 1238126-1239631 bp Ori: VEH17654.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 1238555-1238954 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 1 238555-1 238954 bp Feature: gene Location: 1239905-1240159 bp Ori: VEH17655.1 Feature: domain Description: COG1373 Location: 1239932-1240151 bp Feature: domain Description: COG1 373 Location: 1 239932-1 2401 51 bp Feature: gene Location: 1240163-1240648 bp Ori: VEH17656.1 Feature: domain Description: Nudix_Hydrolase_29 Location: 1240208-1240589 bp Feature: domain Description: Nudix_Hydrolase_29 Location: 1 240208-1 240589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-UG15, COG1373 (Predicted ATPase, AAA+ superfamily ), Nudix_Hydrolase_29 (cd04688)