myRT

myRT report for GCA_900637635.1_52313_A01

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Seq: LR134383.1 Legionella jordanis strain NCTC11533 genome assembly, chromosome: 1 (3133723 bp)
Overview 1 RT 1: 541133-544852 bp 2 RT 2: 736242-742288 bp 3 RT 3: 1879235-1884248 bp 4 RT 4: 1942064-1948545 bp 5 RT 5: 2280524-2286251 bp 6 RT 6: 2700239-2705679 bp Neighborhood of RT #1 [541133, 544875] PinE Methyltransf_31 RVT-GII HTH_Tnp_1 Tra5 Neighborhood of RT #2 [736242, 742311] SUL1 PRK15219 RVT-UG18 SUL1 Neighborhood of RT #3 [1879235, 1884835] HTH_ARSR DUF772 RVT-DGRs Avd_like TIG Neighborhood of RT #4 [1942064, 1948545] TIG Avd_like RVT-DGRs DUF772 Neighborhood of RT #5 [2280524, 2286251] RVT-UG18 Neighborhood of RT #6 [2700239, 2705679] TIG Avd_like RVT-DGRs DUF772 Feature: gene Location: 541133-541390 bp Ori: VEH11689.1 Gene: pin Feature: domain Description: PinE Location: 541136-541370 bp Feature: domain Description: PinE Location: 541 1 36-541 370 bp Feature: gene Location: 541387-542277 bp Ori: VEH11690.1 Feature: domain Description: Methyltransf_31 Location: 541492-541882 bp Feature: domain Description: Methyltransf_31 Location: 541 492-541 882 bp Feature: gene Location: 543277-543720 bp Ori: VEH11691.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 543454-543715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 543454-54371 5 bp Feature: gene Location: 543788-544051 bp Ori: VEH11692.1 Feature: domain Description: HTH_Tnp_1 Location: 543794-544001 bp Feature: domain Description: HTH_Tnp_1 Location: 543794-544001 bp Feature: gene Location: 544084-544875 bp Ori: VEH11693.1 Feature: domain Description: Tra5 Location: 544120-544852 bp Feature: domain Description: Tra5 Location: 5441 20-544852 bp Feature: gene Location: 736242-738050 bp Ori: VEH11879.1 Gene: cynT_1 Feature: domain Description: SUL1 Location: 736257-737232 bp Feature: domain Description: SUL1 Location: 736257-737232 bp Feature: domain Description: PRK15219 Location: 737340-737925 bp Feature: domain Description: PRK1 521 9 Location: 737340-737925 bp Feature: gene Location: 738160-739443 bp Feature: gene Location: 739585-740586 bp Ori: VEH11881.1 Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 739807-740389 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 739807-740389 bp Feature: gene Location: 740778-741698 bp Feature: gene Location: 741838-742311 bp Ori: VEH11883.1 Gene: ychM_1 Feature: domain Description: SUL1 Location: 741871-742288 bp Feature: domain Description: SUL1 Location: 741 871 -742288 bp Feature: gene Location: 1879235-1879552 bp Ori: VEH12859.1 Gene: bigR Feature: domain Description: HTH_ARSR Location: 1879307-1879529 bp Feature: domain Description: HTH_ARSR Location: 1 879307-1 879529 bp Feature: gene Location: 1879835-1881295 bp Ori: VEH12860.1 Feature: domain Description: DUF772 Location: 1880018-1880210 bp Feature: domain Description: DUF772 Location: 1 88001 8-1 88021 0 bp Feature: gene Location: 1881314-1882513 bp Ori: VEH12861.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1881533-1882229 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 881 533-1 882229 bp Feature: gene Location: 1882863-1883204 bp Ori: VEH12862.1 Feature: domain Description: Avd_like Location: 1882890-1883196 bp Feature: domain Description: Avd_like Location: 1 882890-1 8831 96 bp Feature: gene Location: 1883282-1884835 bp Ori: VEH12863.1 Feature: domain Description: TIG Location: 1884023-1884248 bp Feature: domain Description: TIG Location: 1 884023-1 884248 bp Feature: gene Location: 1942064-1943617 bp Ori: VEH12913.1 Feature: domain Description: TIG Location: 1942805-1943030 bp Feature: domain Description: TIG Location: 1 942805-1 943030 bp Feature: gene Location: 1943695-1944036 bp Ori: VEH12914.1 Feature: domain Description: Avd_like Location: 1943722-1944028 bp Feature: domain Description: Avd_like Location: 1 943722-1 944028 bp Feature: gene Location: 1944386-1945585 bp Ori: VEH12915.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1944605-1945301 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 944605-1 945301 bp Feature: gene Location: 1945604-1947064 bp Ori: VEH12916.1 Feature: domain Description: DUF772 Location: 1945787-1945979 bp Feature: domain Description: DUF772 Location: 1 945787-1 945979 bp Feature: gene Location: 1947172-1948545 bp Feature: gene Location: 2280524-2282176 bp Feature: gene Location: 2282301-2283584 bp Feature: gene Location: 2283726-2284979 bp Ori: VEH13224.1 Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2283948-2284530 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 2283948-2284530 bp Feature: gene Location: 2284918-2285838 bp Feature: gene Location: 2286030-2286251 bp Feature: gene Location: 2700239-2701792 bp Ori: VEH13642.1 Feature: domain Description: TIG Location: 2700980-2701205 bp Feature: domain Description: TIG Location: 2700980-2701 205 bp Feature: gene Location: 2701870-2702211 bp Ori: VEH13643.1 Feature: domain Description: Avd_like Location: 2701897-2702203 bp Feature: domain Description: Avd_like Location: 2701 897-2702203 bp Feature: gene Location: 2702561-2703760 bp Ori: VEH13644.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2702780-2703476 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2702780-2703476 bp Feature: gene Location: 2703779-2705239 bp Ori: VEH13645.1 Feature: domain Description: DUF772 Location: 2703962-2704154 bp Feature: domain Description: DUF772 Location: 2703962-27041 54 bp Feature: gene Location: 2705368-2705679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Methyltransf_31 (pfam13847), RVT-GII, HTH_Tnp_1 (pfam01527), Tra5 (COG2801), SUL1 (COG0659), PRK15219 (carbonic anhydrase; Provisional), RVT-UG18, HTH_ARSR (smart00418), DUF772 (pfam05598)
RVT-DGRs, Avd_like (cd16376), TIG