myRT

myRT report for GCA_900638805.1_E4402_hybrid_assembly

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Seq: LR135174.1 Enterococcus faecium isolate E4402 genome assembly, chromosome: 1 (2729991 bp)
Overview 1 RT 1: 1399690-1405777 bp 2 RT 2: 1810389-1815127 bp Neighborhood of RT #1 [1399690, 1405920] DUF3781 RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans FtsK Neighborhood of RT #2 [1810389, 1815204] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 1399690-1399932 bp Feature: domain Description: DUF3781 Location: 1399711-1399921 bp Feature: domain Description: DUF3781 Location: 1 39971 1 -1 399921 bp Feature: gene Location: 1400019-1400180 bp Feature: gene Location: 1400347-1402257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1400680-1401418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 400680-1 401 41 8 bp Feature: domain Description: HNHc Note: nucleases Location: 1401973-1402138 bp Feature: domain Description: HNHc Note: nucleases Location: 1 401 973-1 4021 38 bp Feature: gene Location: 1403146-1404342 bp Feature: domain Description: HTH_XRE Location: 1403170-1403323 bp Feature: domain Description: HTH_XRE Location: 1 4031 70-1 403323 bp Feature: domain Description: Rol_Rep_N Location: 1403356-1403620 bp Feature: domain Description: Rol_Rep_N Location: 1 403356-1 403620 bp Feature: domain Description: Rep_trans Location: 1403644-1404259 bp Feature: domain Description: Rep_trans Location: 1 403644-1 404259 bp Feature: gene Location: 1404526-1405920 bp Feature: domain Description: FtsK Location: 1405195-1405777 bp Feature: domain Description: FtsK Location: 1 4051 95-1 405777 bp Feature: gene Location: 1810389-1810889 bp Feature: domain Description: ArdA Location: 1810407-1810878 bp Feature: domain Description: ArdA Location: 1 81 0407-1 81 0878 bp Feature: gene Location: 1810902-1811054 bp Feature: gene Location: 1811230-1813140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1811563-1812301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 1 563-1 81 2301 bp Feature: domain Description: HNHc Note: nucleases Location: 1812856-1813021 bp Feature: domain Description: HNHc Note: nucleases Location: 1 81 2856-1 81 3021 bp Feature: gene Location: 1813649-1813798 bp Feature: gene Location: 1814020-1815204 bp Feature: domain Description: HTH_XRE Location: 1814050-1814194 bp Feature: domain Description: HTH_XRE Location: 1 81 4050-1 81 41 94 bp Feature: domain Description: Rol_Rep_N Location: 1814227-1814491 bp Feature: domain Description: Rol_Rep_N Location: 1 81 4227-1 81 4491 bp Feature: domain Description: Rep_trans Location: 1814515-1815127 bp Feature: domain Description: Rep_trans Location: 1 81 451 5-1 81 51 27 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3781 (pfam12636), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), FtsK (COG1674), ArdA (pfam07275)