myRT

myRT report for GCA_900638825.1_E4438_hybrid_assembly

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Seq: LR135192.1 Enterococcus faecium isolate E4438 genome assembly, plasmid: 2 (145361 bp)
Overview 1 RT 1: 12636-22443 bp Neighborhood of RT #1 [12636, 22443] VirD4 VirD4 RVT-GII HNH_4 TraG-D_C Feature: gene Location: 12636-14690 bp Feature: gene Location: 14690-16519 bp Feature: domain Description: VirD4 Location: 15095-15941 bp Feature: domain Description: VirD4 Location: 1 5095-1 5941 bp Feature: domain Description: VirD4 Location: 16331-16493 bp Feature: domain Description: VirD4 Location: 1 6331 -1 6493 bp Feature: gene Location: 17214-19130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17553-18288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7553-1 8288 bp Feature: domain Description: HNH_4 Location: 18882-18987 bp Feature: domain Description: HNH_4 Location: 1 8882-1 8987 bp Feature: gene Location: 19256-20050 bp Feature: domain Description: TraG-D_C Location: 19259-19565 bp Feature: domain Description: TraG-D_C Location: 1 9259-1 9565 bp Feature: gene Location: 20047-22443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), RVT-GII, HNH_4 (pfam13395), TraG-D_C (pfam12696)

Seq: LR135193.1 Enterococcus faecium isolate E4438 genome assembly, plasmid: 3 (64154 bp)
Overview 1 RT 1: 16138-26080 bp Neighborhood of RT #1 [16138, 26080] TraG_VirD4 TraG_VirD4 RVT-GII HNH_4 TraG-D_C Feature: gene Location: 16138-18192 bp Feature: gene Location: 18192-20024 bp Feature: domain Description: TraG_VirD4 Location: 18771-19449 bp Feature: domain Description: TraG_VirD4 Location: 18771-19449 bp Feature: domain Description: TraG_VirD4 Location: 19836-20001 bp Feature: domain Description: TraG_VirD4 Location: 19836-2 0001 bp Feature: gene Location: 20719-22635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21058-21793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1058-2 1793 bp Feature: domain Description: HNH_4 Location: 22387-22492 bp Feature: domain Description: HNH_4 Location: 2 2 387-2 2 492 bp Feature: gene Location: 22761-23552 bp Feature: domain Description: TraG-D_C Location: 22764-23070 bp Feature: domain Description: TraG-D_C Location: 2 2 764-2 3070 bp Feature: gene Location: 23549-26080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG_VirD4, RVT-GII, HNH_4 (pfam13395), TraG-D_C (pfam12696)